RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TMEM126BQ8IUX1 230 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 OR52E6Q96RD3 313 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 SLC29A1Q99808 456 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-201ENST00000389328 IRF6O14896 467 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ULK1O75385 1050 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 UMPSP11172 480 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 MZF1P28698 734 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CYP2C18P33260 490 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CPOXP36551 454 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 GSK3BP49841 420 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 DSC2Q02487 901 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 RAB39AQ14964 217 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 HFE2Q6ZVN8 426 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 P2RY8Q86VZ1 359 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 OR10A6Q8NH74 314 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SHKBP1Q8TBC3 707 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 STYXQ8WUJ0 223 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 LINGO1Q96FE5 620 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ADGRE3Q9BY15 652 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 NUP98P52948 1817 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SOWAHBA6NEL2 793 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CYBBP04839 570 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 IL7RP16871 459 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ITGALP20701 1170 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 LCP2Q13094 533 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 TGFBIQ15582 683 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CPSF6Q16630 551 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 PDZK1Q5T2W1 519 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF778Q96MU6 729 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 KLHL32Q96NJ5 620 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 K7EPI3 171 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 TBX1O43435 398 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 RHOCP08134 193 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 RPL10P27635 214 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 MAPK1P28482 360 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SLC11A2P49281 568 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 PITX1P78337 314 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 MOGQ16653 247 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 KIAA0408Q6ZU52 694 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 AHSA2Q719I0 299 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SPATA19Q7Z5L4 167 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 TP53INP2Q8IXH6 220 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 AADATQ8N5Z0 425 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 PNPT1Q8TCS8 783 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 LPPQ93052 612 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 OMA1Q96E52 524 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 KATNAL1Q9BW62 490 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 IKZF3Q9UKT9 509 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 TLL2Q9Y6L7 1015 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 MGAT4DA6NG13 374 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 F8W810 466 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 H0Y858 1186 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZCCHC8Q6NZY4 707 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 WDR37Q9Y2I8 494 aa13.09□□□□□ -0.31
TRAPPC9-201ENST00000389328 CENPXA8MT69 81 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 FBP2O00757 339 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SOCS2O14508 198 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 IGFBP5P24593 272 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC5A2P31639 672 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 POLD2P49005 469 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 BCAP31P51572 246 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TSNQ15631 228 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 MLPHQ9BV36 600 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 KRT84Q9NSB2 600 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 EMCNQ9ULC0 261 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 PRORSD1PA6NEY8 169 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TPD52L2O43399 206 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 OR4F21O95013 312 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SNAP29O95721 258 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 THPOP40225 353 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 AIF1P55008 147 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 RAB15P59190 212 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 DAG1Q14118 895 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
TRAPPC9-201ENST00000389328 TSTD2Q5T7W7 516 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms