RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 INCA1Q0VD86 236 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 TARBP2Q15633 366 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 TECRLQ5HYJ1 363 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 RSBN1Q5VWQ0 802 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 BTBD8Q5XKL5 378 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 TMC5Q6UXY8 1006 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 STRADAQ7RTN6 431 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 RHOXF1Q8NHV9 184 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 BPIFB1Q8TDL5 484 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 FAR1Q8WVX9 515 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 CDK5RAP1Q96SZ6 601 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 MBOAT4Q96T53 435 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 YME1L1Q96TA2 773 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 AMBRA1Q9C0C7 1298 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 EVLQ9UI08 416 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 COL2A1P02458 1487 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 SPATA31C2B4DYI2 1134 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 TBX1O43435 398 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 NOBOXO60393 691 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 UPK1BO75841 260 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 LRIG2O94898 1065 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 CHRNA1P02708 482 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 POLR2EP19388 210 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 NFKB1P19838 968 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 BCAT1P54687 386 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 PITX1P78337 314 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 EMX1Q04741 257 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 DESI1Q6ICB0 168 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 TTC23LQ6PF05 361 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 RFPL4BQ6ZWI9 263 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 PTRH1Q86Y79 214 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 DCP2Q8IU60 420 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 SLC22A15Q8IZD6 547 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 SIX5Q8N196 739 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 MIER2Q8N344 545 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 CDT1Q9H211 546 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 DSN1Q9H410 356 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 NSMCE4AQ9NXX6 385 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 GPSM3Q9Y4H4 160 aa14.94□□□□□ -0.02
CTNS-202ENST00000381870 OAS3Q9Y6K5 1087 aaKnown RBP14.94□□□□□ -0.02
CTNS-202ENST00000381870 MYL3P08590 195 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 UMPSP11172 480 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 DNAJB1P25685 340 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 GABARAPL2P60520 117 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 CCNA1P78396 465 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 NFYCQ13952 458 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 STEAP3Q658P3 488 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 RIMKLAQ8IXN7 391 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 NSUN6Q8TEA1 469 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 PHF10Q8WUB8 498 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 NDRG1Q92597 394 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 PCYT2Q99447 389 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SMOC2Q9H3U7 446 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 ITM2CQ9NQX7 267 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SLAMF8Q9P0V8 285 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 PNMA8BQ9ULN7 279 aaPredicted RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 CNTNAP1P78357 1384 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 DYTNA2CJ06 578 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 CENPBD1B2RD01 187 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 INO80B-WBP1J3KQ70 363 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SLC1A7O00341 560 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 PPP6CO00743 305 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SOAT2O75908 522 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SUPT7LO94864 414 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 SLC1A2P43004 574 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 MAP2K4P45985 399 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 CDH13P55290 713 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 BST2Q10589 180 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 RBM20Q5T481 1227 aaKnown RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 LACC1Q8IV20 430 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 ZBTB8OSQ8IWT0 167 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 HS3ST5Q8IZT8 346 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 FAM83FQ8NEG4 500 aaPredicted RBP14.93□□□□□ -0.02
CTNS-202ENST00000381870 IL37Q9NZH6 218 aa14.93□□□□□ -0.02
CTNS-202ENST00000381870 TAF4O00268 1085 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 RAD51BO15315 384 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 XPNPEP2O43895 674 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 CCNKO75909 580 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 PRKCAP17252 672 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 ENDOUP21128 410 aaKnown RBP14.92□□□□□ -0.02
CTNS-202ENST00000381870 CASP2P42575 452 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 CLK3P49761 638 aaKnown RBP14.92□□□□□ -0.02
CTNS-202ENST00000381870 ESRP1Q6NXG1 681 aaKnown RBP14.92□□□□□ -0.02
CTNS-202ENST00000381870 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
CTNS-202ENST00000381870 PNPLA1Q8N8W4 532 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 ATL1Q8WXF7 558 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 SLIRPQ9GZT3 109 aaKnown RBP14.92□□□□□ -0.02
CTNS-202ENST00000381870 SLC52A3Q9NQ40 469 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 NECTIN3Q9NQS3 549 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 NME7Q9Y5B8 376 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 DNAJC15Q9Y5T4 150 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 A0A087X1B8 175 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 FAM172BPA6NC97 362 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 ASPDHA6ND91 283 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 KMOO15229 486 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 SCO2O43819 266 aa14.92□□□□□ -0.02
CTNS-202ENST00000381870 MAFO75444 373 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms