RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PLA2G16P53816 162 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 TPI1P60174 286 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 ADIGQ0VDE8 80 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 LAPTM5Q13571 262 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 CCNYL2Q5T2Q4 361 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 TMTC4Q5T4D3 741 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FAM72AQ5TYM5 149 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FAM72DQ6L9T8 149 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 PIWIL4Q7Z3Z4 852 aaKnown RBP13.82□□□□□ -0.2
SDC1-202ENST00000381150 ITIH5Q86UX2 942 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FAM72BQ86X60 149 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 SIX5Q8N196 739 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 TNIP3Q96KP6 325 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 C3orf30Q96M34 536 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 KCNA7Q96RP8 456 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 FUNDC2Q9BWH2 189 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 IL22Q9GZX6 179 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 RHOJQ9H4E5 214 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
SDC1-202ENST00000381150 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 FYNP06241 537 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CD151P48509 253 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 ITKQ08881 620 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 DCLRE1AQ6PJP8 1040 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CLEC14AQ86T13 490 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 HS3ST5Q8IZT8 346 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 ITCHQ96J02 903 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 ZFP42Q96MM3 310 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CSF3RQ99062 836 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 EML4Q9HC35 981 aaKnown RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 RIC8BQ9NVN3 520 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TUBA8Q9NY65 449 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 FNDC3AQ9Y2H6 1198 aaKnown RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 TCAF1Q9Y4C2 921 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 LINC00854A0A1B0GVQ3 168 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 LRRC14BA6NHZ5 514 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 MFN2O95140 757 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TRAP1Q12931 704 aaKnown RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 ZNF846Q147U1 533 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 NOMO2Q5JPE7 1267 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 SYPL2Q5VXT5 272 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CLEC20AQ6ZU45 233 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CYS1Q717R9 158 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TAS2R42Q7RTR8 314 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 OR7A2PQ8NGA2 310 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 CHID1Q9BWS9 393 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CEP44Q9C0F1 390 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 SMURF2Q9HAU4 748 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 RCOR3Q9P2K3 495 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 ANAPC2Q9UJX6 822 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 PTBP2Q9UKA9 531 aaKnown RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 NUDT5Q9UKK9 219 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 NOX1Q9Y5S8 564 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 PDE4DIPQ5VU43 2346 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 NCF1BA6NI72 391 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 NCF1CA8MVU1 366 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 SNX2O60749 519 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 BCAS1O75363 584 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 AP2A1O95782 977 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 NCF1P14598 390 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
SDC1-202ENST00000381150 PSMB9P28065 219 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 SHMT2P34897 504 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TRPC1P48995 793 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 VBP1P61758 197 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CYBRD1Q53TN4 286 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TSTD2Q5T7W7 516 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TMC5Q6UXY8 1006 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 SEZ6LQ9BYH1 1024 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 NACA2Q9H009 215 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 MID1IP1Q9NPA3 183 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 PRDM8Q9NQV8 689 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 CACNG4Q9UBN1 327 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 Q9Y3F1 56 aa13.81□□□□□ -0.2
SDC1-202ENST00000381150 I6L893 689 aaPredicted RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 DAB1O75553 588 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 INMTO95050 263 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 HGFP14210 728 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 S100A1P23297 94 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
SDC1-202ENST00000381150 PLA2G4EQ3MJ16 856 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 HFE2Q6ZVN8 426 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 PAGE2Q7Z2X7 111 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 RAB2BQ8WUD1 216 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 HBEGFQ99075 208 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 AKTIPQ9H8T0 292 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 TMEM181Q9P2C4 612 aa13.8□□□□□ -0.2
SDC1-202ENST00000381150 CDH7Q9ULB5 785 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms