RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 SP100P23497 879 aaPredicted RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 CSKP41240 450 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 STC1P52823 247 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PRKAA2P54646 552 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 RAB33AQ14088 237 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 VEPH1Q14D04 833 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PABPC1LQ4VXU2 614 aaKnown RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 TCHHL1Q5QJ38 904 aaPredicted RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 C1orf146Q5VVC0 180 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TPGS2Q68CL5 300 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TPGS1Q6ZTW0 290 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 LCA5Q86VQ0 697 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 HPS6Q86YV9 775 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TMCO5AQ8N6Q1 288 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TRIM43Q96BQ3 446 aaPredicted RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 EID2BQ96D98 161 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 FEM1AQ9BSK4 669 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 FKBPLQ9UIM3 349 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TIMM22Q9Y584 194 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 ANKRD66B4E2M5 251 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 SUPT7LO94864 414 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 ALPIP09923 528 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 FDXRP22570 491 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 SEMG2Q02383 582 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 ACAP2Q15057 778 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PAQR3Q6TCH7 311 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 C11orf96Q7Z7L8 435 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 SNX32Q86XE0 403 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PAWRQ96IZ0 340 aaKnown RBP17.13■□□□□ 0.33
PDX1-201ENST00000381033 TOX2Q96NM4 488 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 C1orf21Q9H246 121 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PREBQ9HCU5 417 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 TMED5Q9Y3A6 229 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PCDHB9Q9Y5E1 797 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 PTGDR2Q9Y5Y4 395 aa17.13■□□□□ 0.33
PDX1-201ENST00000381033 A0A1B0GTL3 188 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 A8MX80 341 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 UBXN8O00124 270 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 CNPP09543 421 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 CD1DP15813 335 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 PIK3R1P27986 724 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 GABRR2P28476 465 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 MRNIPQ6NTE8 343 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 TRMT2BQ96GJ1 504 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 NLE1Q9NVX2 485 aaPredicted RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 VPS51Q9UID3 782 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 TSR3Q9UJK0 312 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 IQCF5A8MTL0 148 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 ATP5BP06576 529 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 MYL4P12829 197 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 ZNF37AP17032 561 aaPredicted RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 BTKQ06187 659 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 DNAL1Q4LDG9 190 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 CUZD1Q86UP6 607 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 CMTM5Q96DZ9 223 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 TMA16Q96EY4 203 aaKnown RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 VMP1Q96GC9 406 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 GSTO2Q9H4Y5 243 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 SPG21Q9NZD8 308 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 C6orf203Q9P0P8 240 aaPredicted RBP17.12■□□□□ 0.33
PDX1-201ENST00000381033 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
PDX1-201ENST00000381033 A6NHS1 94 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 SDHDO14521 159 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 TGM5O43548 720 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 CLTBP09497 229 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 CA5AP35218 305 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 CCDC6Q16204 474 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 FAM45BPQ6NSW5 357 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 KLC3Q6P597 504 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 PIWIL4Q7Z3Z4 852 aaKnown RBP17.11■□□□□ 0.33
PDX1-201ENST00000381033 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 FAM45AQ8TCE6 357 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 TSPAN17Q96FV3 270 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 KLHL42Q9P2K6 505 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 LHX3Q9UBR4 397 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 MTHFD2P13995 350 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 HOXD12P35452 270 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 EPHB3P54753 998 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 PFKFB4Q16877 469 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 CYHR1Q6ZMK1 362 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 CHST9Q7L1S5 443 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 BBS7Q8IWZ6 715 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 RNF148Q8N7C7 305 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 PYDC1Q8WXC3 89 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 SCG3Q8WXD2 468 aaKnown RBP17.11■□□□□ 0.33
PDX1-201ENST00000381033 ESAMQ96AP7 390 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 YME1L1Q96TA2 773 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
PDX1-201ENST00000381033 GIMAP2Q9UG22 337 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 ITGB1BP2Q9UKP3 347 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 PPM1HQ9ULR3 514 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 OR51B4Q9Y5P0 310 aa17.11■□□□□ 0.33
PDX1-201ENST00000381033 COPG1Q9Y678 874 aaKnown RBP17.11■□□□□ 0.33
PDX1-201ENST00000381033 NCF1BA6NI72 391 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms