RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SPATA13Q96N96 652 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CDK15Q96Q40 435 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 GBA3Q9H227 469 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CARD9Q9H257 536 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 CCDC86Q9H6F5 360 aaKnown RBP9.22□□□□□ -0.93
HMGN1-202ENST00000380747 GPR27Q9NS67 375 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 KCTD5Q9NXV2 234 aa9.22□□□□□ -0.93
HMGN1-202ENST00000380747 K7ESM1 405 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ENC1O14682 589 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 FFAR2O15552 330 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 CEP104O60308 925 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 CBFA2T3O75081 653 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF189O75820 626 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PIAS2O75928 621 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ANXA9O76027 345 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 CSF2P04141 144 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 TSHRP16473 764 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PSMB4P28070 264 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 GPR1P46091 355 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 STC1P52823 247 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 GEMP55040 296 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PPARDQ03181 441 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PTSQ03393 145 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 EIF2B5Q13144 721 aaKnown RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 MPP3Q13368 585 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 SNX1Q13596 522 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 CDKN3Q16667 212 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 COL28A1Q2UY09 1125 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF569Q5MCW4 686 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ESRP1Q6NXG1 681 aaKnown RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PNCKQ6P2M8 343 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 MACC1Q6ZN28 852 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 DBX2Q6ZNG2 339 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ARHGEF18Q6ZSZ5 1173 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 LYSMD3Q7Z3D4 306 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 RD3Q7Z3Z2 195 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 TECPR1Q7Z6L1 1165 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 HID1Q8IV36 788 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PHACTR4Q8IZ21 702 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 RBFAQ8N0V3 343 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 PELI3Q8N2H9 469 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 SLC35F6Q8N357 371 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ATL2Q8NHH9 583 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 LMX1AQ8TE12 382 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 BTN2A2Q8WVV5 523 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 C1orf54Q8WWF1 131 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 TSACCQ96A04 125 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 FUBP1Q96AE4 644 aaKnown RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 AP2M1Q96CW1 435 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 WDR92Q96MX6 357 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 LYSMD1Q96S90 227 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 CDC6Q99741 560 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 TMEM121Q9BTD3 319 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 FICDQ9BVA6 458 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 FSD1LQ9BXM9 530 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 TLR10Q9BXR5 811 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 GPR63Q9BZJ6 419 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ABCG8Q9H221 673 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 WDR26Q9H7D7 661 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 SUDS3Q9H7L9 328 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 USP29Q9HBJ7 922 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 UCKL1Q9NWZ5 548 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 KLQ9UEF7 1012 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 FTSJ1Q9UET6 329 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 MOSPD1Q9UJG1 213 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 SHOC2Q9UQ13 582 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF711Q9Y462 761 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 URB1O60287 2271 aaKnown RBP9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ANKRD36A6QL64 1941 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 ZNF462Q96JM2 2506 aa9.21□□□□□ -0.94
HMGN1-202ENST00000380747 LOC285095A0A1B0GVY8 99 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 C5orf60A6NFR6 353 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SCAMP1O15126 338 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 LIASO43766 372 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 KIF5CO60282 957 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 RASGRP1O95267 797 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 LDOC1O95751 146 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 AGTP01019 485 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 FGGP02679 453 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 FTH1P19P0C7X4 201 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 NME1P15531 152 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 KELP23276 732 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 DGKAP23743 735 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 CXCR5P32302 372 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 CHRNA4P43681 627 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 KIAA1024LP59773 190 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 SRP54P61011 504 aaKnown RBP9.2□□□□□ -0.94
HMGN1-202ENST00000380747 CCDC173Q0VFZ6 552 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 C1orf61Q13536 156 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 TCEA2Q15560 299 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 HS1BP3Q53T59 392 aa9.2□□□□□ -0.94
HMGN1-202ENST00000380747 CCDC157Q569K6 752 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms