RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ZDHHC20Q5W0Z9 365 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 FAM151BQ6UXP7 276 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 Q6ZSR6 202 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 MFSD3Q96ES6 412 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 MRM3Q9HC36 420 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 RIMKLBQ9ULI2 386 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 MAD1L1Q9Y6D9 718 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 KNL1Q8NG31 2342 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 GLYATL1P3A0A0U1RQE8 302 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 A0A1B0GTW7 788 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 MAGEB16A2A368 324 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 E7ESA3 106 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 LMNAP02545 664 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 GNSP15586 552 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TSHRP16473 764 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 ECHS1P30084 290 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 CA5AP35218 305 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 HOXD12P35452 270 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 MPLP40238 635 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 ELK3P41970 407 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 GPR1P46091 355 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 PFN3P60673 137 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 NHLH1Q02575 133 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 ACVR1Q04771 509 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 FASTKD3Q14CZ7 662 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 CHRNA6Q15825 494 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 ATP13A5Q4VNC0 1218 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TPRG1LQ5T0D9 272 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 PTAR1Q7Z6K3 402 aaPredicted RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 TMEM135Q86UB9 458 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 SLC22A18ASQ8N1D0 253 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TRAM1L1Q8N609 369 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 MFSD2AQ8NA29 543 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 OR13H1Q8NG92 308 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 HDAC10Q969S8 669 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 FUBP1Q96AE4 644 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 STAMBPL1Q96FJ0 436 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TBATAQ96M53 351 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 FCRL3Q96P31 734 aaPredicted RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 EBNA1BP2Q99848 306 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 ZSCAN5AQ9BUG6 496 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 APOOQ9BUR5 198 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 LGR4Q9BXB1 951 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 SMOC1Q9H4F8 434 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 SUSD2Q9UGT4 822 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TMPRSS11EQ9UL52 423 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 CNOT6Q9ULM6 557 aaKnown RBP12.59□□□□□ -0.39
SMN1-202ENST00000380707 PCDHGA5Q9Y5G8 931 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 TEX264Q9Y6I9 313 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
SMN1-202ENST00000380707 FAM237BA0A1B0GVD1 139 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 OR51F1A6NGY5 319 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 A6NNZ2 444 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 PRR5-ARHGAP8B1AHC4 643 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 H7C0S8 307 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 TLR4O00206 839 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A9O60656 530 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 SRP72O76094 671 aaKnown RBP12.58□□□□□ -0.4
SMN1-202ENST00000380707 PRAMEF1O95521 474 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 RETP07949 1114 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 THEGLP0DJG4 465 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A6P19224 532 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A1P22309 533 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A4P22310 534 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 MC4RP32245 332 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A3P35503 534 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A5P35504 534 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 RABIFP47224 123 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 PDIA2Q13087 525 aaKnown RBP12.58□□□□□ -0.4
SMN1-202ENST00000380707 CBLBQ13191 982 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 ANKRD20A4Q4UJ75 823 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 ARMC3Q5W041 872 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 ADAMTSL4Q6UY14 1074 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 IQCHQ86VS3 1027 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 HEATR4Q86WZ0 1026 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 IFT20Q8IY31 132 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 DTX3LQ8TDB6 740 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 PEX13Q92968 403 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 KLHDC7BQ96G42 594 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 TEX101Q9BY14 249 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 FAM96AQ9H5X1 160 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 WDR26Q9H7D7 661 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A7Q9HAW7 530 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A10Q9HAW8 530 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 UGT1A8Q9HAW9 530 aa12.58□□□□□ -0.4
SMN1-202ENST00000380707 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms