RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CFAP157Q5JU67 520 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 PAQR3Q6TCH7 311 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 KIAA0907Q7Z7F0 614 aaPredicted RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 PTCD3Q96EY7 689 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 SHCBP1LQ9BZQ2 653 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 ZDHHC6Q9H6R6 413 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 ZDHHC2Q9UIJ5 367 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 NPHS1O60500 1241 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 DIAPH2O60879 1101 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 KRT16P08779 473 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 PKMP14618 531 aaKnown RBP19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 WEE1P30291 646 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 PRKAA1Q13131 559 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 EPGNQ6UW88 154 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 FAM151BQ6UXP7 276 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 MAPK15Q8TD08 544 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 INPP5DQ92835 1189 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 ECHDC3Q96DC8 303 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 PHF21BQ96EK2 531 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 SLC2A11Q9BYW1 496 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 SYTL2Q9HCH5 934 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 GALPQ9UBC7 116 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 LNPEPQ9UIQ6 1025 aa19.76■□□□□ 0.75
PDLIM5-205ENST00000380180 CAPN14A8MX76 684 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 POLR2EP19388 210 aaKnown RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 VIPR2P41587 438 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 PTGER3P43115 390 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 ELF3P78545 371 aaPredicted RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 DHCR24Q15392 516 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 DUSP6Q16828 381 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 GEN1Q17RS7 908 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 CTSL3PQ5NE16 218 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 Q6ZVU0 165 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 PIWIL4Q7Z3Z4 852 aaKnown RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 TREML1Q86YW5 311 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 AHI1Q8N157 1196 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 RSPRY1Q96DX4 576 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 CNDP1Q96KN2 507 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 GPR21Q99679 349 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 CCDC106Q9BWC9 280 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 DUS2Q9NX74 493 aaKnown RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 ERVW-1Q9UQF0 538 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 NPIPB15A6NHN6 443 aaPredicted RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 H3BMM5 538 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 MATN2O00339 956 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 GAPDHSO14556 408 aaPredicted RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 HNRNPCL1O60812 293 aaKnown RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 NIPSNAP2O75323 286 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 MAGEA10P43363 369 aaPredicted RBP19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 SEMG2Q02383 582 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 RAD51Q06609 339 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 TRIM68Q6AZZ1 485 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 CYB5D1Q6P9G0 228 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 TSPAN33Q86UF1 283 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 CHST14Q8NCH0 376 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 SORCS1Q8WY21 1168 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 SCRN2Q96FV2 425 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 LYSMD1Q96S90 227 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 C19orf43Q9BQ61 176 aa19.75■□□□□ 0.75
PDLIM5-205ENST00000380180 PLXNB3Q9ULL4 1909 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 PRAMEF1O95521 474 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT2B4P06133 528 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 PTPN4P29074 926 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 ADARP55265 1226 aaKnown RBP19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 SLC9B1Q4ZJI4 515 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 CRTC1Q6UUV9 634 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 SLC22A9Q8IVM8 553 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 VN1R2Q8NFZ6 395 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 CYB5D2Q8WUJ1 264 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 SLC30A3Q99726 388 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 IL26Q9NPH9 171 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 FBXO10Q9UK96 956 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 PPIL1Q9Y3C6 166 aa19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 OAS3Q9Y6K5 1087 aaKnown RBP19.74■□□□□ 0.75
PDLIM5-205ENST00000380180 C5orf42Q9H799 3197 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 F8W8V4 182 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 VPS26AO75436 327 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 CYP17A1P05093 508 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 PYGLP06737 847 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 ESRRAP11474 423 aaPredicted RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 HNRNPLP14866 589 aaKnown RBP eCLIP19.73■□□□□ 0.755e-8■■■□□ 14.7
PDLIM5-205ENST00000380180 BPIP17213 487 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 CALB2P22676 271 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 UBAP2LQ14157 1087 aaKnown RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 OR4D1Q15615 310 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 CERS6Q6ZMG9 384 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 PACS2Q86VP3 889 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 STK40Q8N2I9 435 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 OR2A12Q8NGT7 310 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 RHEBL1Q8TAI7 183 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 OSCP1Q8WVF1 389 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 ZNF641Q96N77 438 aaPredicted RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 TFB2MQ9H5Q4 396 aaKnown RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 ASB8Q9H765 288 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 APPL1Q9UKG1 709 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 STK38LQ9Y2H1 464 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 HDAC3O15379 428 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 GRID2O43424 1007 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 IMPDH1P20839 514 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 CD9P21926 228 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms