RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 POU5F2Q8N7G0 328 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ARL14EPQ8N8R7 260 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 FBXO27Q8NI29 283 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 WDR60Q8WVS4 1066 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 EXOC2Q96KP1 924 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 GCNAQ96QF7 691 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 YME1L1Q96TA2 773 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ERVK-6Q9BXR3 956 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 GSTO2Q9H4Y5 243 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 ALG9Q9H6U8 611 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 WDR55Q9H6Y2 383 aaPredicted RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 MEAF6Q9HAF1 191 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 MAN1C1Q9NR34 630 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SMPD4Q9NXE4 827 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC7A8Q9UHI5 535 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 VPS51Q9UID3 782 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SH3BP1Q9Y3L3 701 aa10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.44□□□□□ -0.74
POLR2J3-201ENST00000379340 UBA6A0AVT1 1052 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 LCHNA4D1U4 455 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 NEMP2A6NFY4 417 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SYCE1LA8MT33 242 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 H0Y3Z8 333 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SDHDO14521 159 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 NEMP1O14524 444 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 BUD23O43709 281 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 FZD6O60353 706 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SNAP91O60641 907 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KERAO60938 352 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SRP72O76094 671 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PIRTP0C851 137 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ITGAXP20702 1163 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 GABRR2P28476 465 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MZF1P28698 734 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 EPHA3P29320 983 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MC4RP32245 332 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CSKP41240 450 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CCR10P46092 362 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 AP2B1P63010 937 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SLC25A3Q00325 362 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TIAL1Q01085 375 aaKnown RBP eCLIP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CYLC2Q14093 348 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PTPRCAPQ14761 206 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PDCD2Q16342 344 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ACCSLQ4AC99 568 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 C1orf146Q5VVC0 180 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 NXNQ6DKJ4 435 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 UGT3A1Q6NUS8 523 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MYLK4Q86YV6 388 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TTC30BQ8N4P2 665 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 STAG3L4Q8TBR4 150 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KIAA1191Q96A73 305 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ALG14Q96F25 216 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MYO19Q96H55 970 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 NSMCE3Q96MG7 304 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PANX3Q96QZ0 392 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SERPINI1Q99574 410 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 UNKQ9C0B0 810 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 MAGEE1Q9HCI5 957 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 POLR3BQ9NW08 1133 aaPredicted RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PKP3Q9Y446 797 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 LRRC42Q9Y546 428 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PCDHGC4Q9Y5F7 938 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 OAS3Q9Y6K5 1087 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 HELZP42694 1942 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TRAV19A0A0A6YYK7 116 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SOCS5O75159 536 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KRT36O76013 467 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 FGF19O95750 216 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ADH1AP07327 375 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PDHA1P08559 390 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PKMP14618 531 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KCNA5P22460 613 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PTGER3P43115 390 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PTDSS1P48651 473 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ATP4BP51164 291 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 EPHB1P54762 984 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CACNG1Q06432 222 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TBL3Q12788 808 aaKnown RBP10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 SQLEQ14534 574 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ARMC12Q5T9G4 340 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 FAM117BQ6P1L5 589 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 TLDC1Q6P9B6 456 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CERS6Q6ZMG9 384 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 CHSY3Q70JA7 882 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 ADGRG6Q86SQ4 1221 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PIM3Q86V86 326 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 DEFB107AQ8IZN7 70 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PELI3Q8N2H9 469 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 KYQ8NBH2 561 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PPFIBP2Q8ND30 876 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 GIMAP7Q8NHV1 300 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 AUTS2Q8WXX7 1259 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 PTERQ96BW5 349 aa10.43□□□□□ -0.74
POLR2J3-201ENST00000379340 LENG8Q96PV6 779 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms