RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PARD6BQ9BYG5 372 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 SP110Q9HB58 689 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 EPB41L5Q9HCM4 733 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 OR1A2Q9Y585 309 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 ENTPD2Q9Y5L3 495 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 DFFAO00273 331 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 DYNC1I1O14576 645 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 TOR1BO14657 336 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 ZIC2O95409 532 aaPredicted RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 SUOXP51687 545 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 MRPS25P82663 173 aaKnown RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 GUCY2DQ02846 1103 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 PPIDQ08752 370 aaKnown RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 GRM3Q14832 879 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 NFATC4Q14934 902 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 PRKD1Q15139 912 aaPredicted RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 CYTH1Q15438 398 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 TMEM52BQ4KMG9 183 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 DARS2Q6PI48 645 aaKnown RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 WDR36Q8NI36 951 aaKnown RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC74AQ96AQ1 378 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 FERMT1Q9BQL6 677 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 TRIM51Q9BSJ1 452 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 CINPQ9BW66 212 aaPredicted RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 CLPBQ9H078 707 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 SUV39H2Q9H5I1 410 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 ATP13A3Q9H7F0 1226 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 ASCL3Q9NQ33 180 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 FAM114A2Q9NRY5 505 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 PNMA8BQ9ULN7 279 aaPredicted RBP13.76□□□□□ -0.21
PRPF18-202ENST00000378572 GPR34Q9UPC5 381 aa13.76□□□□□ -0.21
PRPF18-202ENST00000378572 ARHGAP42A6NI28 874 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 J3KR12 359 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 TNFSF15O95150 251 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 KRT14P02533 472 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 SERPINA4P29622 427 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
PRPF18-202ENST00000378572 LIG3P49916 1009 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 HK3P52790 923 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CFHR1Q03591 330 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CUL1Q13616 776 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 INPP5AQ14642 412 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 UGP2Q16851 508 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 ALG11Q2TAA5 492 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 WSCD2Q2TBF2 565 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 GSTA5Q7RTV2 222 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 ARHGAP12Q8IWW6 846 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC97Q96F63 343 aaPredicted RBP13.75□□□□□ -0.21
PRPF18-202ENST00000378572 TBATAQ96M53 351 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CPEB1Q9BZB8 566 aaKnown RBP13.75□□□□□ -0.21
PRPF18-202ENST00000378572 DPH1Q9BZG8 443 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 MOSPD1Q9UJG1 213 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 ATP8A1Q9Y2Q0 1164 aa13.75□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 ERVH48-1M5A8F1 160 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 AGRPO00253 132 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 NDC80O14777 642 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 CASC3O15234 703 aaKnown RBP13.74□□□□□ -0.21
PRPF18-202ENST00000378572 MTSS1O43312 755 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 C1QL1O75973 258 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 MAP3K6O95382 1288 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 RBL1P28749 1068 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 SRP54P61011 504 aaKnown RBP13.74□□□□□ -0.21
PRPF18-202ENST00000378572 VSNL1P62760 191 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 RHDQ02161 417 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 P3H1Q32P28 736 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 BRAT1Q6PJG6 821 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 C4orf22Q6V702 233 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 ZNF605Q86T29 641 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 SDR16C5Q8N3Y7 309 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 WDR92Q96MX6 357 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 GFM1Q96RP9 751 aaKnown RBP13.74□□□□□ -0.21
PRPF18-202ENST00000378572 APOOQ9BUR5 198 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
PRPF18-202ENST00000378572 SUDS3Q9H7L9 328 aaPredicted RBP13.74□□□□□ -0.21
PRPF18-202ENST00000378572 CCDC151A5D8V7 595 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 CACNB4O00305 520 aaPredicted RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 KCNN4O15554 427 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PRAMEF11O60813 436 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 TNFP01375 233 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 RPLP0P05388 317 aaKnown RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 IVDP26440 423 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 MMP12P39900 470 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 PAPOLAP51003 745 aaKnown RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 GDF10P55107 478 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 BRD3Q15059 726 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 SRLQ86TD4 932 aa13.73□□□□□ -0.21
PRPF18-202ENST00000378572 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
PRPF18-202ENST00000378572 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms