RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 GUK1Q16774 197 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TXNRD1Q16881 649 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 AP5B1Q2VPB7 878 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 USP30Q70CQ3 517 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 KCTD1Q719H9 257 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 SULF1Q8IWU6 871 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 NPAS2Q99743 824 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CLASP1Q7Z460 1538 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 A0A096LPK6 155 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 LCHNA4D1U4 455 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 MCIDASD6RGH6 385 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 SLC28A1O00337 649 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TRAFD1O14545 582 aaPredicted RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 KHNYNO15037 678 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 EYA4O95677 639 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 WDPCPO95876 746 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 BAIAP2L2Q6UXY1 529 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 OR2AP1Q8NGE2 309 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TRPS1Q9UHF7 1281 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 SYNMO15061 1565 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 FAM230AA0A1W2PPH8 454 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 PRSS44E7EML9 344 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 E9PI62 339 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 H3BRB1 525 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 BCAS1O75363 584 aaPredicted RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 PGAM2P15259 253 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CASRP41180 1078 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CDH13P55290 713 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 PRKCDQ05655 676 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 DCAF6Q58WW2 860 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 LIPMQ5VYY2 423 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 GPSM1Q86YR5 675 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 MRPL41Q8IXM3 137 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 MRPL57Q9BQC6 102 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 OPTCQ9UBM4 332 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CDH22Q9UJ99 828 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 NOP16Q9Y3C1 178 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 CAPN8A6NHC0 703 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CABYRO75952 493 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 ITGB1P05556 798 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 MFSD10Q14728 455 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TEAD4Q15561 434 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 HMGN3Q15651 99 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 SYT16Q17RD7 645 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 RNASE12Q5GAN4 147 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 PIWIL4Q7Z3Z4 852 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 ZBTB46Q86UZ6 589 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TCEANCQ8N8B7 351 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 LMAN2LQ9H0V9 348 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 ADGRE2Q9UHX3 823 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 DAGLAQ9Y4D2 1042 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 COL17A1Q9UMD9 1497 aaPredicted RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 NPATQ14207 1427 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CBY3A6NI87 242 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 F8W036 122 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CHRNB1P11230 501 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 BLOC1S1P78537 153 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 TTLL4Q14679 1199 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 STARD3Q14849 445 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 CDK10Q15131 360 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 MTFR2Q6P444 385 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 RTL4Q6ZR62 310 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 METTL16Q86W50 562 aaKnown RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 SLC22A15Q8IZD6 547 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 PARP8Q8N3A8 854 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 MARCH10Q8NA82 808 aaPredicted RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 HSPBAP1Q96EW2 488 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 SEMA4AQ9H3S1 761 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 DENND2DQ9H6A0 471 aaPredicted RBP8.72□□□□□ -1.01
LIG3-202ENST00000378526 BRD9Q9H8M2 597 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 KIAA1257Q9ULG3 409 aa8.72□□□□□ -1.01
LIG3-202ENST00000378526 ADGRL3Q9HAR2 1447 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 ZNF821O75541 412 aaPredicted RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 SLITRK5O94991 958 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 TICAM1Q8IUC6 712 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 PGAM4Q8N0Y7 254 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 OR8K5Q8NH50 307 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 ZCCHC2Q9C0B9 1178 aaKnown RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 NXF3Q9H4D5 531 aaKnown RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 RAP2CQ9Y3L5 183 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 ZNF638Q14966 1978 aaKnown RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 TEX13CA0A0J9YWL9 993 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 C20orf202A1L168 122 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 SH3PXD2BA1X283 911 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 HTR3EA5X5Y0 456 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 LSM8O95777 96 aaKnown RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 CDH5P33151 784 aaPredicted RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 NECTIN1Q15223 517 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 TOMM20Q15388 145 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 TLR1Q15399 786 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 KIF12Q96FN5 646 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 CNDP2Q96KP4 475 aaKnown RBP8.71□□□□□ -1.01
LIG3-202ENST00000378526 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 PANX3Q96QZ0 392 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 TCF7L1Q9HCS4 588 aa8.71□□□□□ -1.01
LIG3-202ENST00000378526 XPNPEP1Q9NQW7 623 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms