RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 C21orf59P57076 290 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 SEMA3AQ14563 771 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 IRAK1BP1Q5VVH5 260 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 BLOC1S3Q6QNY0 202 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 DCBLD1Q8N8Z6 715 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 GPRC5AQ8NFJ5 357 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 CALML6Q8TD86 181 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 CDCA5Q96FF9 252 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 MUS81Q96NY9 551 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 SDR39U1Q9NRG7 319 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 IKZF3Q9UKT9 509 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 BRCA1P38398 1863 aaKnown RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 MIA3Q5JRA6 1907 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 H0Y858 1186 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 ZNF701M0R085 212 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 IRAK2O43187 625 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 KCNH1O95259 989 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 PEX11BO96011 259 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 INHBBP09529 407 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 HAPLN1P10915 354 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 AXLP30530 894 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 LHX1P48742 406 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 GNA12Q03113 381 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 ZNF829Q3KNS6 432 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 TIGD5Q53EQ6 642 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 SLC44A4Q53GD3 710 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 HABP4Q5JVS0 413 aaKnown RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 DPP9Q86TI2 863 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 ESAMQ96AP7 390 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 DOK1Q99704 481 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 KCTD14Q9BQ13 255 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 C1orf50Q9BV19 199 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 TLR9Q9NR96 1032 aa17.94■□□□□ 0.46
GNE-201ENST00000377902 INTS7Q9NVH2 962 aaKnown RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 IFT80Q9P2H3 777 aaPredicted RBP17.94■□□□□ 0.46
GNE-201ENST00000377902 E9PAM4 449 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 FUCA1P04066 466 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 MMP2P08253 660 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 NR4A1P22736 598 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 UFM1P61960 85 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 BNIP2Q12982 314 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 ITIH5Q86UX2 942 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 LRRTM3Q86VH5 581 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 GPC2Q8N158 579 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 BPIFB6Q8NFQ5 453 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 ACDQ96AP0 544 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 CATSPERBQ9H7T0 1116 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 FANCEQ9HB96 536 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 TBCCD1Q9NVR7 557 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 HS3ST4Q9Y661 456 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 ARL5AQ9Y689 179 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 MBLAC1A4D2B0 266 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 NCF1BA6NI72 391 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 NCF1CA8MVU1 366 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 CLASP2O75122 1294 aaKnown RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 IGLV3-25P01717 112 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 PCNAP12004 261 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 NCF1P14598 390 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 LBPP18428 481 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 MLLT10P55197 1068 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 EIF4EBP2Q13542 120 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 MANEALQ5VSG8 457 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 KANK2Q63ZY3 851 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 C16orf87Q6PH81 154 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 DCDC5Q6ZRR9 648 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 RALGPS2Q86X27 583 aaPredicted RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 ZNF354CQ86Y25 554 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 DCP1BQ8IZD4 617 aaKnown RBP17.93■□□□□ 0.46
GNE-201ENST00000377902 PPP1R14BQ96C90 147 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 ERLEC1Q96DZ1 483 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 RNF145Q96MT1 663 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 GID8Q9NWU2 228 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 SH3BP1Q9Y3L3 701 aa17.93■□□□□ 0.46
GNE-201ENST00000377902 K7EPI3 171 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 HOXD8P13378 290 aaPredicted RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 SHMT2P34897 504 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 CD97P48960 835 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 ZNF135P52742 658 aaPredicted RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 SIRPB2Q5JXA9 342 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 FAM117BQ6P1L5 589 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 SLC15A4Q8N697 577 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 ZBTB8BQ8NAP8 495 aaPredicted RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 BORCS5Q969J3 196 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 IMP4Q96G21 291 aaKnown RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 COX4I2Q96KJ9 171 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 ACOX2Q99424 681 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 SLC25A51Q9H1U9 297 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 CSNK1G1Q9HCP0 422 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 INIPQ9NRY2 104 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 SELENONQ9NZV5 590 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 GPR45Q9Y5Y3 372 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 FGF4P08620 206 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 TCF3P15923 654 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 HRH2P25021 359 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 EEF1DP29692 281 aaKnown RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 BRCC3P46736 316 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms