RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 AUHQ13825 339 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 TTC27Q6P3X3 843 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 AFTPHQ6ULP2 937 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 PHF13Q86YI8 300 aaPredicted RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NSUN3Q9H649 340 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 HMGXB4Q9UGU5 601 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RSL24D1Q9UHA3 163 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NCANO14594 1321 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 KLK3P07288 261 aaPredicted RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 CYP3A5P20815 502 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ICAM3P32942 547 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RPL5P46777 297 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RTL3Q8N8U3 475 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SETD9Q8NE22 299 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 MAGEE2Q8TD90 523 aaPredicted RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 COPS8Q99627 209 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 PRDM12Q9H4Q4 367 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NEK6Q9HC98 313 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 GALNT8Q9NY28 637 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 POLG2Q9UHN1 485 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NUP98P52948 1817 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 HLA-DQA2P01906 255 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 MRPS5P82675 430 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 PMF1Q6P1K2 205 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 C12orf56Q8IXR9 622 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 DPP10Q8N608 796 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 GIPC3Q8TF64 312 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 TPD52L3Q96J77 140 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 KXD1Q9BQD3 176 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 POLE3Q9NRF9 147 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ATXN10Q9UBB4 475 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 COQ6Q9Y2Z9 468 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SCN2BO60939 215 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SEC22BO75396 215 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SLC5A3P53794 718 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 MTTPP55157 894 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 LSM3P62310 102 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RPP38P78345 283 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 QPCTQ16769 361 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SLC10A6Q3KNW5 377 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RNF44Q7L0R7 432 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 EPHX4Q8IUS5 362 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ZCCHC9Q8N567 271 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SLC22A17Q8WUG5 538 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 S100A13Q99584 98 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 KCNN2Q9H2S1 579 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 CD207Q9UJ71 328 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SCAMP1O15126 338 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 TFPIP10646 304 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ATXN1P54253 815 aaKnown RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 NR1H2P55055 460 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ITPRIPL2Q3MIP1 535 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 SLC39A5Q6ZMH5 540 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 KCNMB4Q86W47 210 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 GPSM1Q86YR5 675 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 FBXW8Q8N3Y1 598 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 OR56A4Q8NGH8 313 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 STARD8Q92502 1023 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 DLG3Q92796 817 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 C12orf42Q96LP6 360 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 MBOAT7Q96N66 472 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 RNF157Q96PX1 679 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ETNK2Q9NVF9 386 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF624Q9P2J8 865 aaPredicted RBP10.79□□□□□ -0.68
HIF3A-205ENST00000377670 BTBD3Q9Y2F9 522 aa10.79□□□□□ -0.68
HIF3A-205ENST00000377670 A0A096LPK6 155 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 A8MUI8 341 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TK2O00142 265 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 B4GALT4O60513 344 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TM7SF2O76062 418 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CDK14O94921 469 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TNFP01375 233 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TTPAP49638 278 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FOLH1Q04609 750 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 UBAP2LQ14157 1087 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SLC5A9Q2M3M2 681 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SAMD4BQ5PRF9 694 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CYP2U1Q7Z449 544 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 C8orf59Q8N0T1 100 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FAM45AQ8TCE6 357 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SPPL2AQ8TCT8 520 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 B3GALT6Q96L58 329 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FBXL18Q96ME1 805 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 HAPLN3Q96S86 360 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 NDNQ99608 321 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CDH19Q9H159 772 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SIX2Q9NPC8 291 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 EFCAB10A6NFE3 127 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CLDN4O14493 209 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms