RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 PCDHGC3Q9UN70 934 aa13.59□□□□□ -0.23
GPC6-201ENST00000377047 A0A1W2PRU2 124 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 OR10H3O60404 316 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 TNFRSF8P28908 595 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 IGFALSP35858 605 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 C8orf59Q8N0T1 100 aaPredicted RBP13.58□□□□□ -0.23
GPC6-201ENST00000377047 AADATQ8N5Z0 425 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 IL12RB2Q99665 862 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 SH3GL3Q99963 347 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 MYRFQ9Y2G1 1151 aa13.58□□□□□ -0.23
GPC6-201ENST00000377047 SLC6A2P23975 617 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 GDF6Q6KF10 455 aaPredicted RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 FOXR2Q6PJQ5 311 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SLC26A9Q7LBE3 791 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 HID1Q8IV36 788 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 QKIQ96PU8 341 aaKnown RBP eCLIP13.58□□□□□ -0.248e-7■■■■■ 30.2
GPC6-201ENST00000377047 ELL3Q9HB65 397 aaPredicted RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 CLN6Q9NWW5 311 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 TOR4AQ9NXH8 423 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 NRP1O14786 923 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 BIRC5O15392 142 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 LRIG2O94898 1065 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SNUPNO95149 360 aaKnown RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 IDO1P14902 403 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 AKT2P31751 481 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 ZNF132P52740 706 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 ARMC4Q5T2S8 1044 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 EIF1ADQ8N9N8 165 aaKnown RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 HDAC3O15379 428 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 BCL10O95999 233 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 TRBC1P01850 177 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 C4BPBP20851 252 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 RAB14P61106 215 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 CPTPQ5TA50 214 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 CHST15Q7LFX5 561 aaPredicted RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 DLG3Q92796 817 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 ZNF354BQ96LW1 612 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 GPR21Q99679 349 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 RGSL1A5PLK6 1076 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 TSC22D2O75157 780 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 NT5EP21589 574 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 NAE1Q13564 534 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 PLD5Q8N7P1 536 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SPATA22Q8NHS9 363 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SLC38A3Q99624 504 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 MRPS26Q9BYN8 205 aaKnown RBP13.58□□□□□ -0.24
GPC6-201ENST00000377047 MATN4O95460 622 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 MYBPC1Q00872 1141 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 TNK2Q07912 1038 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 IRGCQ6NXR0 463 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 DGCR6LQ9BY27 220 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 CHRAC1Q9NRG0 131 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 SRRDQ9UH36 339 aa13.58□□□□□ -0.24
GPC6-201ENST00000377047 LRCH4O75427 683 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZNF37AP17032 561 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 HDDC2Q7Z4H3 204 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 C12orf42Q96LP6 360 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 RACGAP1Q9H0H5 632 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 IKZF3Q9UKT9 509 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ENPP3O14638 875 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 FPGTO14772 594 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TOP3BO95985 862 aaKnown RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 ALPPL2P10696 532 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ITGA1P56199 1179 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 DLG2Q15700 870 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZIK1Q3SY52 487 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 CUZD1Q86UP6 607 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 LCN9Q8WX39 176 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ALG3Q92685 438 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 CDH19Q9H159 772 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 NEK6Q9HC98 313 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZNF624Q9P2J8 865 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 ALOX15BO15296 676 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TPSB2P20231 275 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 FSHRP23945 695 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 NDST2P52849 883 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZNF155Q12901 538 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 TPSAB1Q15661 275 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 MINDY4Q4G0A6 757 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 CNPPD1Q9BV87 410 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ATG10Q9H0Y0 220 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 EXD2Q9NVH0 621 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 ZNF214Q9UL59 606 aaPredicted RBP13.57□□□□□ -0.24
GPC6-201ENST00000377047 TRAF6Q9Y4K3 522 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 A0A1W2PPM1 405 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 CCL22O00626 93 aa13.57□□□□□ -0.24
GPC6-201ENST00000377047 DAOAP59103 153 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms