RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	RNF148	Q8N7C7	305 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	ERP27	Q96DN0	273 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	MRGPRX2	Q96LB1	330 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	FCRL3	Q96P31	734 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	PPP1R2P1	Q96PQ5	205 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SMG5	Q9UPR3	1016 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	SCN10A	Q9Y5Y9	1956 aa		13.5	□□□□□ -0.25
DDR1-225	ENST00000376568	TCRBV5S1A1T	A0A578	114 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	ART3	Q13508	389 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	AMZ1	Q400G9	498 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	LRIG3	Q6UXM1	1119 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	UMODL1-AS1	Q8N2C9	162 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	CDYL2	Q8N8U2	506 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TERB1	Q8NA31	727 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	NXPE3	Q969Y0	559 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	CPNE1	Q99829	537 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	DNAJC28	Q9NX36	388 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	NDOR1	Q9UHB4	597 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	MID2	Q9UJV3	735 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	PHTF1	Q9UMS5	762 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	STON1	Q9Y6Q2	735 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TRPM7	Q96QT4	1865 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568		A0A0G2JN53	185 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	GSAP	A4D1B5	854 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	GMNN	O75496	209 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	RPP40	O75818	363 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	AP1S1	P61966	158 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	CAMK2G	Q13555	558 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	ZNF789	Q5FWF6	425 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	GPSM1	Q86YR5	675 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TRIM42	Q8IWZ5	723 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	IQCK	Q8N0W5	287 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	MIER2	Q8N344	545 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	CARS2	Q9HA77	564 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	APPL1	Q9UKG1	709 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TIMM22	Q9Y584	194 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	PLXNA1	Q9UIW2	1896 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	ISM1	B1AKI9	464 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568		F8W8V4	182 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	GLRA3	O75311	464 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	ENO3	P13929	434 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TERF2	Q15554	542 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	HECTD2	Q5U5R9	776 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	TAF8	Q7Z7C8	310 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	FAM160A2	Q8N612	972 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	BRSK1	Q8TDC3	778 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	PSKH2	Q96QS6	385 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	SUN2	Q9UH99	717 aa		13.49	□□□□□ -0.25
DDR1-225	ENST00000376568	RECQL5	O94762	991 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ANP32D	O95626	131 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	AHSG	P02765	367 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ACTR1B	P42025	376 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	GNPDA1	P46926	289 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ACTR1A	P61163	376 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ARF5	P84085	180 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	TSN	Q15631	228 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	CYP1B1	Q16678	543 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	FUT11	Q495W5	492 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	PREPL	Q4J6C6	727 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SH2D4B	Q5SQS7	431 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	PAQR3	Q6TCH7	311 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	GPR156	Q8NFN8	814 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	NECAB3	Q96P71	396 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	LRRC37B	Q96QE4	947 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	UBE2Z	Q9H832	354 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ZFP69B	Q9UJL9	534 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	NARS	O43776	548 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ZMPSTE24	O75844	475 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SIX3	O95343	332 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	HOXB8	P17481	243 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	AMD1	P17707	334 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SPAM1	P38567	509 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	GDF5	P43026	501 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ALDH9A1	P49189	494 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ANKRD54	Q6NXT1	300 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	AFTPH	Q6ULP2	937 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	PHC3	Q8NDX5	983 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SLC39A13	Q96H72	371 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	C1orf74	Q96LT6	269 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ACE2	Q9BYF1	805 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	KCNK12	Q9HB15	430 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SYTL2	Q9HCH5	934 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ADA2	Q9NZK5	511 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	IGSF9	Q9P2J2	1179 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	KL	Q9UEF7	1012 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	RABGEF1	Q9UJ41	708 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	PLAGL1	Q9UM63	463 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	AKAP10	O43572	662 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	VNN2	O95498	520 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	PKM	P14618	531 aa	Known RBP	13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	MTA1	Q13330	715 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	CYTH1	Q15438	398 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	GRTP1	Q5TC63	336 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	ACAD11	Q709F0	780 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	SPATA21	Q7Z572	469 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	C12orf40	Q86WS4	652 aa		13.48	□□□□□ -0.25
DDR1-225	ENST00000376568	OSCP1	Q8WVF1	389 aa		13.48	□□□□□ -0.25

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