RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 CFAP52Q8N1V2 620 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 FAM210AQ96ND0 272 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 CLPBQ9H078 707 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 PCDHB5Q9Y5E4 795 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
CUL4A-203ENST00000375441 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 SOCS2O14508 198 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 SLC11A2P49281 568 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 CLK1P49759 484 aaKnown RBP13.1□□□□□ -0.31
CUL4A-203ENST00000375441 CCR3P51677 355 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF678Q5SXM1 525 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 TMEM26Q6ZUK4 368 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 SPATA19Q7Z5L4 167 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 MON1AQ86VX9 555 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 CILP2Q8IUL8 1156 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 ASIC4Q96FT7 647 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 MRGPRX2Q96LB1 330 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 EPB41L1Q9H4G0 881 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 ATP13A1Q9HD20 1204 aa13.1□□□□□ -0.31
CUL4A-203ENST00000375441 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
CUL4A-203ENST00000375441 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 FFAR3O14843 346 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 GPR42O15529 346 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 RHOQP17081 205 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 STT3AP46977 705 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 GSK3BP49841 420 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 TUBA4AP68366 448 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 MARCH8Q5T0T0 291 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 EID3Q8N140 333 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 TRPV3Q8NET8 790 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 LINGO1Q96FE5 620 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ZFP14Q9HCL3 533 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 PADI4Q9UM07 663 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 LY75O60449 1722 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 EVPLQ92817 2033 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 C7orf72A4D263 438 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 LRRC14BA6NHZ5 514 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 CBFA2T3O75081 653 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 SEC22BO75396 215 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 RHOCP08134 193 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 CCT8P50990 548 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 XKR5Q6UX68 686 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 C11orf84Q9BUA3 381 aaPredicted RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 RAD21L1Q9H4I0 556 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 SOX17Q9H6I2 414 aaPredicted RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 FANCEQ9HB96 536 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 MAFKO60675 156 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 CST1P01037 141 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ANXA6P08133 673 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 PSMB9P28065 219 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 LSM3P62310 102 aaKnown RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 GRB7Q14451 532 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 RGS21Q2M5E4 152 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 LDLRAP1Q5SW96 308 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 KCTD11Q693B1 232 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 PAQR3Q6TCH7 311 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ANKRD23Q86SG2 305 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 METTL25Q8N6Q8 603 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ANKRD49Q8WVL7 239 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 TMEM74Q96NL1 305 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ADGRE3Q9BY15 652 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 TRIM54Q9BYV2 358 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 ACTR3BQ9P1U1 418 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 CNOT11Q9UKZ1 510 aaKnown RBP13.09□□□□□ -0.31
CUL4A-203ENST00000375441 PHF24Q9UPV7 400 aa13.09□□□□□ -0.31
CUL4A-203ENST00000375441 A0A1W2PPW3 197 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 ZBTB11O95625 1053 aaPredicted RBP13.08□□□□□ -0.32
CUL4A-203ENST00000375441 SPATA31D3P0C874 917 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 CD1EP15812 388 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 HTR7P34969 479 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 DPP6P42658 865 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 PCYT1AP49585 367 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 NDST2P52849 883 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 DIO3P55073 304 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 ILF2Q12905 390 aaKnown RBP13.08□□□□□ -0.32
CUL4A-203ENST00000375441 MAPKAPK3Q16644 382 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 SIRPB2Q5JXA9 342 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 PERM1Q5SV97 790 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 SPATA31D4Q6ZUB0 917 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 PAQR9Q6ZVX9 377 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
CUL4A-203ENST00000375441 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
CUL4A-203ENST00000375441 CRLS1Q9UJA2 301 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms