RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PTCD2Q8WV60 388 aaKnown RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 FUBP1Q96AE4 644 aaKnown RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 SERPINB12Q96P63 405 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 AGAP2Q99490 1192 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 CARD6Q9BX69 1037 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 RAB17Q9H0T7 212 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 ERVMER34-1Q9H9K5 563 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 MRM3Q9HC36 420 aaKnown RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 BPIFA1Q9NP55 256 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 PARD6AQ9NPB6 346 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 IL26Q9NPH9 171 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 PHPT1Q9NRX4 125 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 NLE1Q9NVX2 485 aaPredicted RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 WHRNQ9P202 907 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 ANAPC5Q9UJX4 755 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 APPL1Q9UKG1 709 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 UTP11Q9Y3A2 253 aaKnown RBP11.31□□□□□ -0.6
HSPG2-202ENST00000374676 TCAF1Q9Y4C2 921 aa11.31□□□□□ -0.6
HSPG2-202ENST00000374676 CNOT1A5YKK6 2376 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 GLYATL1P3A0A0U1RQE8 302 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SPTY2D1-AS1A0A0U1RR47 76 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 BHMG1C9JSJ3 638 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 H7C0S8 307 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 CACNB4O00305 520 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 TP73O15350 636 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 BUD23O43709 281 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 DFNA5O60443 496 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 GFRA3O60609 400 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 AVILO75366 819 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SLC4A1P02730 911 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 KELP23276 732 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 MGAT1P26572 445 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 HTR1BP28222 390 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 THOP1P52888 689 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 ITGA8P53708 1063 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 XIAPP98170 497 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 ACVR1Q04771 509 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 GRIK2Q13002 908 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 PDE1CQ14123 709 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SEPT6Q14141 434 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 PTPRCAPQ14761 206 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 NFATC4Q14934 902 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 ZNF423Q2M1K9 1284 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 CCDC38Q502W7 563 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 TSTD2Q5T7W7 516 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 LAYNQ6UX15 382 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 MACC1Q6ZN28 852 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SPATS2Q86XZ4 545 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SLC22A18ASQ8N1D0 253 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 OXR1Q8N573 874 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 NOA1Q8NC60 698 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 PPHLN1Q8NEY8 458 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 OR13C4Q8NGS5 318 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SEC14L1Q92503 715 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 CDKN2AIPNLQ96HQ2 116 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 COX14Q96I36 57 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 KIFC1Q9BW19 673 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 SPATA16Q9BXB7 569 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 TRIM31Q9BZY9 425 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 WDR26Q9H7D7 661 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 GDF3Q9NR23 364 aa11.3□□□□□ -0.6
HSPG2-202ENST00000374676 CNOT6Q9ULM6 557 aaKnown RBP11.3□□□□□ -0.6
HSPG2-202ENST00000374676 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 PLXNB3Q9ULL4 1909 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 LNP1A1A4G5 178 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 AGAP14A8MT82 685 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 FADS2P1A8MWK0 482 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 GOLGA8MH3BSY2 632 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 GAPDHSO14556 408 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-202ENST00000374676 TNFRSF10CO14798 259 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 MYCLP1P12525 358 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-202ENST00000374676 ENGP17813 658 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 RXRGP48443 463 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 CDK3Q00526 305 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 CAV1Q03135 178 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 CALCOCO2Q13137 446 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 ITGA9Q13797 1035 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 FZD2Q14332 565 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
HSPG2-202ENST00000374676 CHRNA6Q15825 494 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 HLA-BQ31612 363 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 TPRG1LQ5T0D9 272 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 ALS2CLQ60I27 953 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 TCEAL6Q6IPX3 200 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 PRR23CQ6ZRP0 262 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 HEATR4Q86WZ0 1026 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 ZNF398Q8TD17 642 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 BTN2A2Q8WVV5 523 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 TCEAL3Q969E4 200 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 HIC2Q96JB3 615 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 DNAJC1Q96KC8 554 aaKnown RBP11.29□□□□□ -0.6
HSPG2-202ENST00000374676 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms