RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PRORSD1PA6NEY8 169 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 ABLIM3O94929 683 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 CSF2RAP15509 400 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 ARCN1P48444 511 aaKnown RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 KPNA1P52294 538 aaPredicted RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 CDH15P55291 814 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 PARP15Q460N3 678 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 NHSL2Q5HYW2 709 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 HMBOX1Q6NT76 420 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 ZBTB49Q6ZSB9 765 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 CENPLQ8N0S6 344 aaPredicted RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 PELI3Q8N2H9 469 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 FAIMQ9NVQ4 179 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 UXTQ9UBK9 157 aaPredicted RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 ZNHIT2Q9UHR6 403 aa16.88■□□□□ 0.29
PHF1-202ENST00000374516 KIAA0100Q14667 2235 aaKnown RBP16.88■□□□□ 0.29
PHF1-202ENST00000374516 MUSKO15146 869 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 ENTPD1P49961 510 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SFSWAPQ12872 951 aaKnown RBP16.87■□□□□ 0.29
PHF1-202ENST00000374516 LRRC8EQ6NSJ5 796 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 Q6ZNX1 250 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 FIBCD1Q8N539 461 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 OR7D4Q8NG98 312 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 WBP2Q969T9 261 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 PPP1R2P1Q96PQ5 205 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 OMDQ99983 421 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 RHOJQ9H4E5 214 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 VPS45Q9NRW7 570 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TBCCD1Q9NVR7 557 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 DUS2Q9NX74 493 aaKnown RBP16.87■□□□□ 0.29
PHF1-202ENST00000374516 CACNA2D2Q9NY47 1150 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SARDHQ9UL12 918 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 HEATR9A2RTY3 570 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 ATP6V1G1O75348 118 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 COL6A2P12110 1019 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 CKMT2P17540 419 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SGSHP51688 502 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 IL10RBQ08334 325 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 RALGDSQ12967 914 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
PHF1-202ENST00000374516 CYP2R1Q6VVX0 501 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TEX26Q8N6G2 289 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TTC16Q8NEE8 873 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 ARRDC2Q8TBH0 407 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 CYP2S1Q96SQ9 504 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SPON2Q9BUD6 331 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 CRISPLD2Q9H0B8 497 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TRPC7Q9HCX4 862 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 SMPD4Q9NXE4 827 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 XPR1Q9UBH6 696 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 CD300AQ9UGN4 299 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 TDRKHQ9Y2W6 561 aaKnown RBP16.87■□□□□ 0.29
PHF1-202ENST00000374516 ACOT9Q9Y305 439 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 YIPF1Q9Y548 306 aa16.87■□□□□ 0.29
PHF1-202ENST00000374516 CCL22O00626 93 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 FBP2O00757 339 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 PRRG1O14668 218 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 TSPAN3O60637 253 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 CLTBP09497 229 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 ACRP10323 421 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 CORO1AP31146 461 aaKnown RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 SLC11A2P49281 568 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 TSTD2Q5T7W7 516 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 IL31Q6EBC2 164 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 PPP4R4Q6NUP7 873 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 CHSY3Q70JA7 882 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 SLC39A11Q8N1S5 342 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 FAM47BQ8NA70 645 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 HMGCLL1Q8TB92 370 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 TFAP2CQ92754 450 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 PPWD1Q96BP3 646 aaKnown RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 GPR78Q96P69 363 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 CDK5RAP1Q96SZ6 601 aaKnown RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 EFHD1Q9BUP0 239 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 TREX1Q9NSU2 369 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 EBF1Q9UH73 591 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 NPHS1O60500 1241 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 HDCP19113 662 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 MAPKAPK2P49137 400 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 SERPINH1P50454 418 aaKnown RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 PRKCQQ04759 706 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 ZNF460Q14592 562 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 C16orf72Q14CZ0 275 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 ZNF470Q6ECI4 717 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 ELMSAN1Q6PJG2 1045 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 GPR141Q7Z602 305 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 SLC41A1Q8IVJ1 513 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 SPATA6LQ8N4H0 392 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 NXNL1Q96CM4 212 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 ZNF689Q96CS4 500 aaPredicted RBP16.86■□□□□ 0.29
PHF1-202ENST00000374516 SPAG4Q9NPE6 437 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 NCKIPSDQ9NZQ3 722 aa16.86■□□□□ 0.29
PHF1-202ENST00000374516 AURKAO14965 403 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms