RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 A6NHS1 94 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 STC2O76061 302 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 LRG1P02750 347 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 UGT2B4P06133 528 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 PCNAP12004 261 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 MAGEA6P43360 314 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
CXCL12-203ENST00000374429 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
CXCL12-203ENST00000374429 FBXO39Q8N4B4 442 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 ACMSDQ8TDX5 336 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 CYB5D2Q8WUJ1 264 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 IMP4Q96G21 291 aaKnown RBP10.78□□□□□ -0.68
CXCL12-203ENST00000374429 C3orf30Q96M34 536 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 NSMCE3Q96MG7 304 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 CENPOQ9BU64 300 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 EIF2B4Q9UI10 523 aaKnown RBP10.78□□□□□ -0.68
CXCL12-203ENST00000374429 CRLS1Q9UJA2 301 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 TRMT6Q9UJA5 497 aaKnown RBP10.78□□□□□ -0.68
CXCL12-203ENST00000374429 PKP3Q9Y446 797 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 YIPF1Q9Y548 306 aa10.78□□□□□ -0.68
CXCL12-203ENST00000374429 TM7SF2O76062 418 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 TGDSO95455 350 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 SBK3P0C264 359 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 CCL5P13501 91 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 NCK1P16333 377 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ATP5F1P24539 256 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-203ENST00000374429 HCAR3P49019 387 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 DIO3P55073 304 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 OR4D1Q15615 310 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 DNAL1Q4LDG9 190 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ZYG11AQ6WRX3 759 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 BBS7Q8IWZ6 715 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 SLC22A15Q8IZD6 547 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 TMCO5AQ8N6Q1 288 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 MDGA1Q8NFP4 955 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 CALML6Q8TD86 181 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ZFYVE19Q96K21 471 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 TUBB6Q9BUF5 446 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ITM2BQ9Y287 266 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 A0A088AWK7 358 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 SAC3D1A6NKF1 404 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 PIP5K1BO14986 540 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 AKAP10O43572 662 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 NDUFB5O43674 189 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 CABYRO75952 493 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 CXCL14O95715 111 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 RPL34P49207 117 aaKnown RBP10.77□□□□□ -0.69
CXCL12-203ENST00000374429 TUFMP49411 452 aaKnown RBP10.77□□□□□ -0.69
CXCL12-203ENST00000374429 SLC18A1P54219 525 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 POU4F1Q01851 419 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 GRB7Q14451 532 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 GPNMBQ14956 572 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 MSANTD2Q6P1R3 559 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 LIMS2Q7Z4I7 341 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 TSPAN33Q86UF1 283 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ABCB8Q9NUT2 735 aa10.77□□□□□ -0.69
CXCL12-203ENST00000374429 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.69
CXCL12-203ENST00000374429 EPHB3P54753 998 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 CASP9P55211 416 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 AP5B1Q2VPB7 878 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 UGT3A1Q6NUS8 523 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 RALGPS2Q86X27 583 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 ARRDC2Q8TBH0 407 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 NR1H4Q96RI1 486 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 C17orf80Q9BSJ5 609 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 TBCDQ9BTW9 1192 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 HGH1Q9BTY7 390 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 EBF3Q9H4W6 596 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 OR6C75A6NL08 312 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 ZNF839A8K0R7 811 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 H7C4K7 107 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 PSMD12O00232 456 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 INPP4BO15327 924 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 TEX28O15482 410 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 MAP3K13O43283 966 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 HNRNPRO43390 633 aaKnown RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 GRID2O43424 1007 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 LRATO95237 230 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 S1PR4O95977 384 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 CRABP2P29373 138 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 APLP1P51693 650 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 AIF1P55008 147 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 PFKPQ01813 784 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 KLC1Q07866 573 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 CPSF6Q16630 551 aaKnown RBP eCLIP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 BNC2Q6ZN30 1099 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 GABPB2Q8TAK5 448 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 PGAP3Q96FM1 320 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 PRICKLE1Q96MT3 831 aaPredicted RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 PKMYT1Q99640 499 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 MRPL57Q9BQC6 102 aaKnown RBP10.76□□□□□ -0.69
CXCL12-203ENST00000374429 LINC00597Q9H2U6 94 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 ANGPTL2Q9UKU9 493 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 CCL26Q9Y258 94 aa10.76□□□□□ -0.69
CXCL12-203ENST00000374429 OR2AG2A6NM03 316 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms