RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CDC16Q13042 620 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 CDH18Q13634 790 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 BLMHQ13867 455 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 FASTKQ14296 549 aaKnown RBP15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 DDIASQ8IXT1 998 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 OVCA2Q8WZ82 227 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 EID2BQ96D98 161 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 ZNF558Q96NG5 402 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 ANKRD27Q96NW4 1050 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 BIRC8Q96P09 236 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 SLC39A3Q9BRY0 314 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 EFCAB1Q9HAE3 211 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 TLR9Q9NR96 1032 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 TAS2R13Q9NYV9 303 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 DNAJC15Q9Y5T4 150 aa15.92■□□□□ 0.14
CNKSR1-202ENST00000374253 CLASP2O75122 1294 aaKnown RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 LUC7L3O95232 432 aaKnown RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 UBTFL6P0CB48 400 aaPredicted RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 TRIP10Q15642 601 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ZNF423Q2M1K9 1284 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 MMEL1Q495T6 779 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 SCIMPQ6UWF3 145 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 CHST9Q7L1S5 443 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 SLC39A11Q8N1S5 342 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 L3HYPDHQ96EM0 354 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 C19orf60Q96EN9 201 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 LHX3Q9UBR4 397 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 TIMM22Q9Y584 194 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 INSL5Q9Y5Q6 135 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 H3BNX3 289 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 PSMD12O00232 456 aaPredicted RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 BNIP3LO60238 219 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ECI2O75521 394 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 URODP06132 367 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ALDOCP09972 364 aaKnown RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ACRP10323 421 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ITGB6P18564 788 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 CHRM3P20309 590 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ITGB8P26012 769 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 PRDX3P30048 256 aaKnown RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 CA5AP35218 305 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 RALGDSQ12967 914 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 LAMB3Q13751 1172 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 FLOT2Q14254 428 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 PIGGQ5H8A4 983 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 LYSMD3Q7Z3D4 306 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 HS6ST3Q8IZP7 471 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 AFAP1L2Q8N4X5 818 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 DDI1Q8WTU0 396 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 DDX50Q9BQ39 737 aaKnown RBP15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 ECSITQ9BQ95 431 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 TMEM39AQ9NV64 488 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 STK39Q9UEW8 545 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 LRCH1Q9Y2L9 728 aa15.91■□□□□ 0.14
CNKSR1-202ENST00000374253 FBP2O00757 339 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 PIP5K1BO14986 540 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 TEX28O15482 410 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 LINC00032P0C843 101 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 SUOXP51687 545 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 APLP1P51693 650 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 KLC1Q07866 573 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 MTA1Q13330 715 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 GRB7Q14451 532 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 SFT2D3Q587I9 215 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 CTSL3PQ5NE16 218 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 TMEM154Q6P9G4 183 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 NCEH1Q6PIU2 408 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 CPNE9Q8IYJ1 553 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 BHLHE22Q8NFJ8 381 aaPredicted RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 GDPD5Q8WTR4 605 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 EEF1AKMT1Q8WVE0 214 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 PEX13Q92968 403 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 ADGRE3Q9BY15 652 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 AKTIPQ9H8T0 292 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 GMPR2Q9P2T1 348 aaKnown RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 OGDHLQ9ULD0 1010 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 ASB1Q9Y576 335 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 UNC80Q8N2C7 3258 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 RANBP2P49792 3224 aaKnown RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 CKMP06732 381 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 GABRR2P28476 465 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 SLC26A3P40879 764 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 RFTN1Q14699 578 aaPredicted RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 UGT3A2Q3SY77 523 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 PITRM1Q5JRX3 1037 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 AAGABQ6PD74 315 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 CHSY3Q70JA7 882 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 ANKRD33Q7Z3H0 272 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 KBTBD6Q86V97 674 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 HERC6Q8IVU3 1022 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 PGAM4Q8N0Y7 254 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 FBXO39Q8N4B4 442 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 TOP1MTQ969P6 601 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 RPL10LQ96L21 214 aaKnown RBP15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 PCDHAC1Q9H158 963 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 TNKS2Q9H2K2 1166 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 EBF3Q9H4W6 596 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 IL1RL2Q9HB29 575 aa15.9■□□□□ 0.14
CNKSR1-202ENST00000374253 INTS10Q9NVR2 710 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms