RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 PGM1P36871 562 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 ARHGAP15Q53QZ3 475 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 ZNF678Q5SXM1 525 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 ACAD11Q709F0 780 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 RTL10Q7L3V2 364 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 OR2AP1Q8NGE2 309 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 RHEBL1Q8TAI7 183 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 ATOH8Q96SQ7 321 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 C1orf21Q9H246 121 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 TDP1Q9NUW8 608 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 CDYLQ9Y232 598 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 ZNF106Q9H2Y7 1883 aaKnown RBP19.5■□□□□ 0.71
HDAC1-201ENST00000373548 PFDN6O15212 129 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 PEX11AO75192 247 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 SMIM24O75264 130 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 NIPSNAP2O75323 286 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 ARHGEF15O94989 841 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 MTHFD2P13995 350 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CPOXP36551 454 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 NTHL1P78549 312 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 KLF10Q13118 480 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 NAA25Q14CX7 972 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 AARS2Q5JTZ9 985 aaKnown RBP19.49■□□□□ 0.71
HDAC1-201ENST00000373548 TAS2R42Q7RTR8 314 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 ZSWIM9Q86XI8 627 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 SLC30A3Q99726 388 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CCDC28BQ9BUN5 200 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 DERL2Q9GZP9 239 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 ATP13A3Q9H7F0 1226 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 EML4Q9HC35 981 aaKnown RBP19.49■□□□□ 0.71
HDAC1-201ENST00000373548 IKZF3Q9UKT9 509 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 L3MBTL1Q9Y468 752 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CXorf51AA0A1B0GTR3 108 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 UBXN8O00124 270 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 GRM6O15303 877 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 MAGEC1O60732 1142 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 TPBGLP0DKB5 382 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 HSPA1AP0DMV8 641 aaKnown RBP19.49■□□□□ 0.71
HDAC1-201ENST00000373548 HSPA1BP0DMV9 641 aaKnown RBP19.49■□□□□ 0.71
HDAC1-201ENST00000373548 COPAP53621 1224 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 MXRA7P84157 204 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 UBE3AQ05086 875 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CACNG1Q06432 222 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 GALNT1Q10472 559 aaPredicted RBP19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CDKN3Q16667 212 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 DNAL1Q4LDG9 190 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 UNC50Q53HI1 259 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 CUZD1Q86UP6 607 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 KIAA1191Q96A73 305 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 ZFYVE1Q9HBF4 777 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 HS3ST2Q9Y278 367 aa19.49■□□□□ 0.71
HDAC1-201ENST00000373548 ENTPD5O75356 428 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 PYGLP06737 847 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 HOXA9P31269 272 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 HNF1BP35680 557 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 HERVK_113P63132 956 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 RAD51Q06609 339 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 C7orf61Q8IZ16 206 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 ARHGAP24Q8N264 748 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 PAF1Q8N7H5 531 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 PTGR2Q8N8N7 351 aaPredicted RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 CMTM5Q96DZ9 223 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 MAELQ96JY0 434 aaKnown RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 TRMOQ9BU70 441 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 ERVK-6Q9BXR3 956 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SLC30A1Q9Y6M5 507 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 C1orf232A0A0U1RR37 186 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 NEDD8-MDP1E9PL57 170 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SDHDO14521 159 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 GAPDHSO14556 408 aaPredicted RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 UBFD1O14562 309 aaKnown RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 VPS26AO75436 327 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SUPT7LO94864 414 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SYN1P17600 705 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 CD9P21926 228 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SERPINA4P29622 427 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 PRDX6P30041 224 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 PTGER3P43115 390 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 ADARP55265 1226 aaKnown RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 SNRPD1P62314 119 aaKnown RBP19.48■□□□□ 0.71
HDAC1-201ENST00000373548 C22orf39Q6P5X5 142 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 GIMAP7Q8NHV1 300 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 BBS2Q9BXC9 721 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 LINC00597Q9H2U6 94 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 ZNF385DQ9H6B1 395 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 FIS1Q9Y3D6 152 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 RWDD3Q9Y3V2 267 aa19.48■□□□□ 0.71
HDAC1-201ENST00000373548 CAPN8A6NHC0 703 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 TRPC5OSA6NMA1 111 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 C5orf67F2Z3F1 127 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 KERAO60938 352 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 CLASP2O75122 1294 aaKnown RBP19.47■□□□□ 0.71
HDAC1-201ENST00000373548 RAP1GDS1P52306 607 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 ATP6V0D1P61421 351 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 ZNF77Q15935 545 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 PRSS36Q5K4E3 855 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 TMEM198Q66K66 360 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 SIDT2Q8NBJ9 832 aaKnown RBP19.47■□□□□ 0.71
HDAC1-201ENST00000373548 IRF7Q92985 503 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms