RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 RALGPS2Q86X27 583 aaPredicted RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 BRSK1Q8TDC3 778 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 BCAP29Q9UHQ4 241 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 KRT87PA6NCN2 255 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 MATN2O00339 956 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 INPPL1O15357 1258 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 SMAD6O43541 496 aaKnown RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 OR4F21O95013 312 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 LRATO95237 230 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 PRAMEF1O95521 474 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 KCNK10P57789 538 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 C1QTNF8P60827 252 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 PPP1R8Q12972 351 aaKnown RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 TMTC4Q5T4D3 741 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 ADGRF1Q5T601 910 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 FAM45BPQ6NSW5 357 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 PIANPQ8IYJ0 282 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 C2orf73Q8N5S3 287 aaPredicted RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 STAG3L4Q8TBR4 150 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 GANCQ8TET4 914 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 CAAP1Q9H8G2 361 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 BATF3Q9NR55 127 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 ABCB8Q9NUT2 735 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 TMEM248Q9NWD8 314 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
NCDN-203ENST00000373253 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
NCDN-203ENST00000373253 A0A1B0GVM2 712 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 KPNA3O00505 521 aaPredicted RBP13.15□□□□□ -0.31
NCDN-203ENST00000373253 STC2O76061 302 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 BMP1P13497 986 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 NCK1P16333 377 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 AQP4P55087 323 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 FOXA1P55317 472 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 TBCCQ15814 346 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 EPGNQ6UW88 154 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.15□□□□□ -0.31
NCDN-203ENST00000373253 OR13J1Q8NGT2 312 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 STYXQ8WUJ0 223 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 CASD1Q96PB1 797 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 BBS2Q9BXC9 721 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 EBF3Q9H4W6 596 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 MARCH5Q9NX47 278 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 LNPEPQ9UIQ6 1025 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 OTOFQ9HC10 1997 aa13.15□□□□□ -0.31
NCDN-203ENST00000373253 ZNF646O15015 1829 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 DPPA5A6NC42 116 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 UPK3BL1B0FP48 263 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 UPK3BL2E5RIL1 263 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 AZIN1O14977 448 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 YBEYP58557 167 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
NCDN-203ENST00000373253 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 APCDD1Q8J025 514 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 UMODL1-AS1Q8N2C9 162 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 FBXW8Q8N3Y1 598 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 ZNF461Q8TAF7 563 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 NUDT8Q8WV74 236 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 NRG4Q8WWG1 115 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 CYGBQ8WWM9 190 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 PTERQ96BW5 349 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 OR2AG2A6NM03 316 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 TRIM24O15164 1050 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 S1PR4O95977 384 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 KPNA1P52294 538 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 DIO3P55073 304 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 DSC1Q08554 894 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 SEMA3AQ14563 771 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 AP5B1Q2VPB7 878 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 NET1Q7Z628 596 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 C19orf60Q96EN9 201 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 CROTQ9UKG9 612 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 A0A088AWK7 358 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 TIPRLO75663 272 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 CCL5P13501 91 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 PKMP14618 531 aaKnown RBP13.14□□□□□ -0.31
NCDN-203ENST00000373253 ITGALP20701 1170 aa13.14□□□□□ -0.31
NCDN-203ENST00000373253 PRDX3P30048 256 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms