RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 RXRGP48443 463 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 GRSF1Q12849 480 aaKnown RBP eCLIP12.66□□□□□ -0.38
GPC4-201ENST00000370828 PPP1R8Q12972 351 aaKnown RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 ZNF460Q14592 562 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 BICRALQ6AI39 1079 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 DCBLD1Q8N8Z6 715 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 SELENOMQ8WWX9 145 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TMCO6Q96DC7 493 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 MAGEE1Q9HCI5 957 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 PTGFRNQ9P2B2 879 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 ZNRF3Q9ULT6 936 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 CASKO14936 926 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 OXSR1O95747 527 aaPredicted RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 MLYCDO95822 493 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 C9P02748 559 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 F7P08709 466 aaPredicted RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 POLR2JP52435 117 aaKnown RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 ELP6Q0PNE2 266 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 C1QTNF12Q5T7M4 302 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 FSTL5Q8N475 847 aaPredicted RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 C12orf29Q8N999 325 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 AP3S1Q92572 193 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 GAD1Q99259 594 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TRMOQ9BU70 441 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 MEGF6O75095 1541 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 ZNF879B4DU55 563 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 T-ENOLP0DO92 83 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TCF4P15884 667 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 EPB42P16452 691 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 MAPK12P53778 367 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 SPIBQ01892 262 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.38
GPC4-201ENST00000370828 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 MED28Q9H204 178 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 OR12D3Q9UGF7 316 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 GTF2A1LQ9UNN4 478 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 H3BMM5 538 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 PPP1R11O60927 126 aaPredicted RBP12.66□□□□□ -0.38
GPC4-201ENST00000370828 LRATO95237 230 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 YES1P07947 543 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 FGRP09769 529 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 TGFB2P61812 414 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 PSMD5Q16401 504 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 CNSTQ6PJW8 725 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 PIK3R3Q92569 461 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 WNT8BQ93098 351 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 KIFC1Q9BW19 673 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 MIR1-1HGQ9H1L0 117 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 MIEF1Q9NQG6 463 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 CATSPERZQ9NTU4 200 aa12.66□□□□□ -0.38
GPC4-201ENST00000370828 CHRM5P08912 532 aaPredicted RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 GM2AP17900 193 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 MPP1Q00013 466 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 RAB39AQ14964 217 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 TOMM20Q15388 145 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 USP39Q53GS9 565 aaKnown RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 PHF10Q8WUB8 498 aaKnown RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 PRMT6Q96LA8 375 aaPredicted RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 TMEM138Q9NPI0 162 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 ZNHIT2Q9UHR6 403 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 CDC14AQ9UNH5 594 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 SLC15A5A6NIM6 579 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 IL7RP16871 459 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 AQP1P29972 269 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 ALDH9A1P49189 494 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 STARP49675 285 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 IRF9Q00978 393 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 RHDQ02161 417 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 EFEMP1Q12805 493 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 GPR65Q8IYL9 337 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 CLIP4Q8N3C7 705 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 OR6J1Q8NGC5 347 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 POF1BQ8WVV4 589 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 PIH1D2Q8WWB5 315 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 AAASQ9NRG9 546 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 ULK1O75385 1050 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 BCAS2O75934 225 aaPredicted RBP12.65□□□□□ -0.38
GPC4-201ENST00000370828 NFICP08651 508 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 PIRTP0C851 137 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 GSTT2BP0CG30 244 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 NNMTP40261 264 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 RFX3P48380 749 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 STXBP5Q5T5C0 1151 aa12.65□□□□□ -0.38
GPC4-201ENST00000370828 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms