RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 PPM1JQ5JR12 505 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 VWA5B1Q5TIE3 1220 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 XAGE5Q8WWM1 108 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 MTMR9Q96QG7 549 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 SSR3Q9UNL2 185 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 ZMYM2Q9UBW7 1377 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 CHRM5P08912 532 aaPredicted RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 NIPA1Q7RTP0 329 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 NKX2-3Q8TAU0 364 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 PTCD2Q8WV60 388 aaKnown RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 APOLD1Q96LR9 279 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 ACE2Q9BYF1 805 aaPredicted RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 CHMP1AQ9HD42 196 aaPredicted RBP18.12■□□□□ 0.49
SNX27-202ENST00000368841 C2CD2Q9Y426 696 aa18.12■□□□□ 0.49
SNX27-202ENST00000368841 MPP1Q00013 466 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TAF10Q12962 218 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TOP3AQ13472 1001 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 OR4K2Q8NGD2 314 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 Q96MT0 163 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ZNF607Q96SK3 696 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 A0A0J9YYE9 177 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 SERPINA1P01009 418 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 FOXM1Q08050 763 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 FBXO42Q6P3S6 717 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 NAPRTQ6XQN6 538 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ANKRD46Q86W74 232 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 FAM105AQ9NUU6 356 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 FKTNO75072 461 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 AP2A2O94973 939 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 UGT1A5P35504 534 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 STAT5AP42229 794 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TIGD2Q4W5G0 525 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 NAXEQ8NCW5 288 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 PPM1MQ96MI6 270 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TCF25Q9BQ70 676 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TTC24A2A3L6 582 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 ZNF432O94892 652 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 INMTO95050 263 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 DEFB115Q30KQ5 88 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 C6orf52Q5T4I8 152 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ZNF280BQ86YH2 543 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 UBR7Q8N806 425 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ATAD1Q8NBU5 361 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 CHST4Q8NCG5 386 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 CNPPD1Q9BV87 410 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 TBC1D10AQ9BXI6 508 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 NRXN1Q9ULB1 1477 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ITGA2P17301 1181 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 CTSOP43234 321 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 MAP2K5Q13163 448 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 CBX3Q13185 183 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ZBTB6Q15916 424 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 DCLRE1AQ6PJP8 1040 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 PDP1Q9P0J1 537 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 MEIS2O14770 477 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 PRKCGP05129 697 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 MYBL2P10244 700 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ARF4P18085 180 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 RYKP34925 604 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 MASP1P48740 699 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 DDR1Q08345 913 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 ITGB3BPQ13352 177 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 RASSF6Q6ZTQ3 369 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 SEMA3GQ9NS98 782 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 CRNNQ9UBG3 495 aaPredicted RBP18.11■□□□□ 0.49
SNX27-202ENST00000368841 SETBP1Q9Y6X0 1596 aa18.11■□□□□ 0.49
SNX27-202ENST00000368841 C15orf38-AP3S2A0A0A6YYH1 394 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 SLC22A3O75751 556 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 C2orf80Q0P641 193 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 RGS21Q2M5E4 152 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 ARPINQ7Z6K5 226 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 OAFQ86UD1 273 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 MCEMP1Q8IX19 187 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 RNF31Q96EP0 1072 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 GLYATL1P3A0A0U1RQE8 302 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 DHRS12A0PJE2 317 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 SLC7A2P52569 658 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 KIAA1522Q9P206 1035 aaPredicted RBP18.1■□□□□ 0.49
SNX27-202ENST00000368841 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 CORO2BQ9UQ03 480 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 RPL17P18621 184 aaKnown RBP18.1■□□□□ 0.49
SNX27-202ENST00000368841 CPTPQ5TA50 214 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 IRGCQ6NXR0 463 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 CUZD1Q86UP6 607 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 SATL1Q86VE3 508 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 GPR65Q8IYL9 337 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 DEFB119Q8N690 84 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 GSTCDQ8NEC7 633 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 SAR1AQ9NR31 198 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 NR2E3Q9Y5X4 410 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 APODP05090 189 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 MXD1Q05195 221 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 PCBP2Q15366 365 aaKnown RBP eCLIP18.1■□□□□ 0.492e-9■■■■■ 28.6
SNX27-202ENST00000368841 SLC43A3Q8NBI5 491 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 RPL10LQ96L21 214 aaKnown RBP18.1■□□□□ 0.49
SNX27-202ENST00000368841 DUSP16Q9BY84 665 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 TBC1D30Q9Y2I9 924 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 REREQ9P2R6 1566 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 WNT3AP56704 352 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 DSC2Q02487 901 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms