RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 SOD1P00441 154 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 F13A1P00488 732 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 F9P00740 461 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 PTGIRP43119 386 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 SYKP43405 635 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 MAPK9P45984 424 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 LEPRP48357 1165 aaKnown RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 MAPKAPK2P49137 400 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 GEMIN4P57678 1058 aaKnown RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 CDK3Q00526 305 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 NRG1Q02297 640 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 RAD51Q06609 339 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 BIRC2Q13490 618 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 PNOCQ13519 176 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 RAPGEF1Q13905 1077 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 UGT8Q16880 541 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 GLIPR1L2Q4G1C9 344 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZRANB3Q5FWF4 1079 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 DOK6Q6PKX4 331 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZNF517Q6ZMY9 492 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 DPPA4Q7L190 304 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 TRIM74Q86UV6 250 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 CBARPQ8N350 705 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 CCDC185Q8N715 623 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 FDCSPQ8NFU4 85 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 OR10G6Q8NH81 332 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 INPP5DQ92835 1189 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ECHDC3Q96DC8 303 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 AHCYL2Q96HN2 611 aaKnown RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC38A3Q99624 504 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 BARD1Q99728 777 aaKnown RBP8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 TBC1D10AQ9BXI6 508 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLC29A3Q9BZD2 475 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ING2Q9H160 280 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 PDFQ9HBH1 243 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 TMEM59LQ9UK28 342 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 ITGB1BP2Q9UKP3 347 aa8.43□□□□□ -1.06
HMGB1P39-201ENST00000366304 MED13LQ71F56 2210 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 A0A1B0GTL3 188 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 J3KR12 359 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 TRAFD1O14545 582 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 P4HA2O15460 535 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZW10O43264 779 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 KIF1CO43896 1103 aaKnown RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZG16O60844 167 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 SPAG6O75602 509 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 NDUFA10O95299 355 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 IVLP07476 585 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ELFN1P0C7U0 828 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZSCAN22P10073 491 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 HOXB4P17483 251 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 CASP14P31944 242 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ADRA1BP35368 520 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ETFBP38117 255 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 USP8P40818 1118 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ETV3P41162 512 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 NDST2P52849 883 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ITGA1P56199 1179 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ATP11AP98196 1134 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ACOX1Q15067 660 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZRSR2Q15696 482 aaKnown RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 CNGA3Q16281 694 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 C15orf59Q2T9L4 293 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 COBLL1Q53SF7 1204 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 BRAT1Q6PJG6 821 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 HSD11B1LQ7Z5J1 315 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 DNAAF5Q86Y56 855 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 PYROXD2Q8N2H3 581 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 EMC1Q8N766 993 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ADAMTS17Q8TE56 1095 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 SHC3Q92529 594 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 CCDC47Q96A33 483 aaKnown RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 PNPLA2Q96AD5 504 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 STAMBPL1Q96FJ0 436 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 ZNF641Q96N77 438 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 SMIM14Q96QK8 99 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 OR6C1Q96RD1 312 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 NCAPGQ9BPX3 1015 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 CRACR2AQ9BSW2 395 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 BRD8Q9H0E9 1235 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 SLAMF7Q9NQ25 335 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 LHX9Q9NQ69 397 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 PHPT1Q9NRX4 125 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 B4GALT6Q9UBX8 382 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 TBC1D29Q9UFV1 150 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 LNPEPQ9UIQ6 1025 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 STAP1Q9ULZ2 295 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 HPCAL4Q9UM19 191 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 PRKAB1Q9Y478 270 aa8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 MN1Q10571 1320 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P39-201ENST00000366304 A6NL46 340 aa8.41□□□□□ -1.06
HMGB1P39-201ENST00000366304 RASA4BC9J798 803 aa8.41□□□□□ -1.06
HMGB1P39-201ENST00000366304 GOLGA8SH3BPF8 625 aa8.41□□□□□ -1.06
HMGB1P39-201ENST00000366304 INPP4BO15327 924 aa8.41□□□□□ -1.06
HMGB1P39-201ENST00000366304 LRRTM2O43300 516 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms