RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PPP4R4Q6NUP7 873 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 TTC23LQ6PF05 361 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF347Q96SE7 839 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 DHRS4Q9BTZ2 278 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 SPRTNQ9H040 489 aaPredicted RBP15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 EHD1Q9H4M9 534 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 GDAP2Q9NXN4 497 aa15.93■□□□□ 0.14
CLSTN1-201ENST00000361311 SLIT2O94813 1529 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ELOVL7A1L3X0 281 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PRR23AA6NEV1 266 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ABCB1P08183 1280 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PIRTP0C851 137 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 HOXD12P35452 270 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 RXRGP48443 463 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 GSK3BP49841 420 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CDC42P60953 191 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 DGKZQ13574 1117 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PHKG1Q16816 387 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 FOXB2Q5VYV0 432 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 BORAQ6PGQ7 559 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PLET1Q6UQ28 207 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 GPR180Q86V85 440 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 DEPDC4Q8N2C3 294 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PQLC3Q8N755 202 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 TWNKQ96RR1 684 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CHCHD6Q9BRQ6 235 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CLDN5O00501 218 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF286BP0CG31 522 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 GRK3P35626 688 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 IST1P53990 364 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ATAD3BQ5T9A4 648 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 NEK5Q6P3R8 708 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 DCP1BQ8IZD4 617 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 DCBLD1Q8N8Z6 715 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 RNFT2Q96EX2 444 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 TRIM45Q9H8W5 580 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CEPT1Q9Y6K0 416 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 EFCAB9A8MZ26 197 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 FAM220BPB1ANY3 271 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 LRIG2O94898 1065 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 MT-CYBP00156 380 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 IL7RP16871 459 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 HDCP19113 662 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ITGALP20701 1170 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CHI3L1P36222 383 aaPredicted RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 CDKL1Q00532 357 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 HS6ST3Q8IZP7 471 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 GRPEL2Q8TAA5 225 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 MTFMTQ96DP5 389 aaKnown RBP15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 ADGRE3Q9BY15 652 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 TPK1Q9H3S4 243 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 SCUBE2Q9NQ36 999 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 TCAF1Q9Y4C2 921 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 PEX16Q9Y5Y5 336 aa15.92■□□□□ 0.14
CLSTN1-201ENST00000361311 NTRK1P04629 796 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 AZGP1P25311 298 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ADORA2AP29274 412 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 LCP2Q13094 533 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 PYDC2Q56P42 97 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 WSCD1Q658N2 575 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ZCCHC8Q6NZY4 707 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 TXNDC11Q6PKC3 985 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SVOPLQ8N434 492 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CLEC4DQ8WXI8 215 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 POP5Q969H6 163 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 FEM1CQ96JP0 617 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SOX17Q9H6I2 414 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 GBA2Q9HCG7 927 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CDV3Q9UKY7 258 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ANKRD12Q6UB98 2062 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 F5H5T6 163 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CYBBP04839 570 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 TSPAN19P0C672 248 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 OXCT1P55809 520 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CLCQ05315 142 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 FGD3Q5JSP0 725 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 NEK10Q6ZWH5 1172 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ZC3HC1Q86WB0 502 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 TMBIM1Q969X1 311 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 MOCOSQ96EN8 888 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 POLR1EQ9GZS1 481 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 DNAJB9Q9UBS3 223 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 LRFN2Q9ULH4 789 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 PTPRJQ12913 1337 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 TOPAZ1Q8N9V7 1692 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 BHMG1C9JSJ3 638 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 GMPRP36959 345 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 GLUD2P49448 558 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ELP6Q0PNE2 266 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SYTL3Q4VX76 610 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 NCBP2-AS2Q69YL0 99 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 PTCD2Q8WV60 388 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SELENOMQ8WWX9 145 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 OCEL1Q9H607 264 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 AKTIPQ9H8T0 292 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SMOXQ9NWM0 555 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 PDP1Q9P0J1 537 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SERPINA1P01009 418 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CD36P16671 472 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms