RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PDE10AQ9Y233 779 aa14.88□□□□□ -0.03
UBAP1-202ENST00000359544 TNFRSF10AO00220 468 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 MGEA5O60502 916 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 IPO13O94829 963 aaKnown RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 GABARAPO95166 117 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 AHSGP02765 367 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 GSNP06396 782 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 BMP4P12644 408 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SLC6A2P23975 617 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PTPN3P26045 913 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 YWHAQP27348 245 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 GRK3P35626 688 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SCNN1AP37088 669 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ARSFP54793 590 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 TPD52P55327 224 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 EPS8Q12929 822 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 DAG1Q14118 895 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PAFAH1B3Q15102 231 aaKnown RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PKDCCQ504Y2 493 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 KCTD11Q693B1 232 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SNX29P2Q8IUI4 249 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 KIAA2013Q8IYS2 634 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 OR6Q1Q8NGQ2 317 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 COPS5Q92905 334 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 LRRC58Q96CX6 371 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ELMO2Q96JJ3 720 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 TRMOQ9BU70 441 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PTPRHQ9HD43 1115 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 NECTIN3Q9NQS3 549 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SETD4Q9NVD3 440 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ASB14A6NK59 587 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 H0Y858 1186 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 TOR1BO14657 336 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PGGT1BP53609 377 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ZNF460Q14592 562 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 FAM83EQ2M2I3 478 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ZIK1Q3SY52 487 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PAGE2BQ5JRK9 111 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 TAPT1Q6NXT6 567 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 CEP97Q8IW35 865 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ELMOD1Q8N336 334 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 MIER2Q8N344 545 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 RNF139Q8WU17 664 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PHF10Q8WUB8 498 aaKnown RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PPP1R13LQ8WUF5 828 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SLC22A17Q8WUG5 538 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SLC35F5Q8WV83 523 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 HEXDCQ8WVB3 486 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 AURKBQ96GD4 344 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 SLC30A3Q99726 388 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 KCTD14Q9BQ13 255 aaPredicted RBP14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 ALG2Q9H553 416 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 TLR9Q9NR96 1032 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PCDHGA11Q9Y5H2 935 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 PCDHA9Q9Y5H5 950 aa14.87□□□□□ -0.03
UBAP1-202ENST00000359544 A8MU76 341 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 FXYD1O00168 92 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 NDUFS2O75306 463 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 NADKO95544 446 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 HPRP00739 348 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 MTHFD1P11586 935 aaKnown RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 SMPD1P17405 629 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 TKTL1P51854 596 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 SLC12A2P55011 1212 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 BEX3Q00994 111 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 LAMC2Q13753 1193 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 HIST2H2ACQ16777 129 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 OTUD3Q5T2D3 398 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 PPP1R26Q5T8A7 1209 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 PDZD4Q76G19 769 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 FAM35AQ86V20 835 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 NT5DC4Q86YG4 428 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 LRRC49Q8IUZ0 686 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 SLC22A9Q8IVM8 553 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 CNTN4Q8IWV2 1026 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 RNF149Q8NC42 400 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 C19orf60Q96EN9 201 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 OGDHLQ9ULD0 1010 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 TESMINQ9Y4I5 508 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 LAMA2P24043 3122 aaKnown RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 A8MT66 165 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 UBXN8O00124 270 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 KCNK1O00180 336 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 TBC1D4O60343 1298 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 ARIH2O95376 493 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 ALDOCP09972 364 aaKnown RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 ATN1P54259 1190 aaPredicted RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 LAMTOR4Q0VGL1 99 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 CDH17Q12864 832 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 CAPRIN1Q14444 709 aaKnown RBP14.86□□□□□ -0.03
UBAP1-202ENST00000359544 VPS26BQ4G0F5 336 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 C6orf141Q5SZD1 244 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 JADE1Q6IE81 842 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 TBPL2Q6SJ96 375 aa14.86□□□□□ -0.03
UBAP1-202ENST00000359544 HEATR4Q86WZ0 1026 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms