RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SCARA5Q6ZMJ2 495 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM83FQ8NEG4 500 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 STRA6Q9BX79 667 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 TMEM117Q9H0C3 514 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 INTS2Q9H0H0 1204 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 TOR3AQ9H497 397 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 ERAP1Q9NZ08 941 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 CXXC1Q9P0U4 656 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 SNX7Q9UNH6 387 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 KATNA1O75449 491 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 CTSHP09668 335 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 ME2P23368 584 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 HTR1BP28222 390 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 NPY2RP49146 381 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 HLCSP50747 726 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 MERTKQ12866 999 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 CTF1Q16619 201 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 HIST2H2ACQ16777 129 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 GEN1Q17RS7 908 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM26DQ5JW98 314 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 ANKRD22Q5VYY1 191 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 TMEM65Q6PI78 240 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 CXCL17Q6UXB2 119 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF704Q6ZNC4 412 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 GDPD3Q7L5L3 318 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 MAP4K3Q8IVH8 894 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 OR5B17Q8NGF7 314 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 SLC2A14Q8TDB8 520 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 ST8SIA2Q92186 375 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 BTN2A3PQ96KV6 586 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 CXCL16Q9H2A7 254 aa9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 SOX17Q9H6I2 414 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 EIF3KQ9UBQ5 218 aaKnown RBP9.3□□□□□ -0.92
SMARCAL1-202ENST00000358207 SAC3D1A6NKF1 404 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM25AB3EWG3 89 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM25CB3EWG5 89 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM25GB3EWG6 89 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 TBX1O43435 398 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 CDK14O94921 469 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 HLA-DRAP01903 254 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 BPGMP07738 259 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 PPP5CP53041 499 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 NME5P56597 212 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 LAMC2Q13753 1193 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 DPH6Q7L8W6 267 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 WDR49Q8IV35 697 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 FBXO36Q8NEA4 188 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 RDM1Q8NG50 284 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 MAFAQ8NHW3 353 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 MARVELD3Q96A59 401 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 VTI1AQ96AJ9 217 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 TIFAQ96CG3 184 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 PCDHAC1Q9H158 963 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 DMAC2Q9NW81 257 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 ARHGAP28Q9P2N2 729 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 VPS28Q9UK41 221 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 DNPEPQ9ULA0 475 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 IGKV6D-21A0A0A0MT36 114 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 E7ENX8 843 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 H0Y858 1186 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 GSRP00390 522 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 PDGFAP04085 211 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 PRKCBP05771 671 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 RETP07949 1114 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 KRT19P08727 400 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 PSKH1P11801 424 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 TARBP2Q15633 366 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF677Q86XU0 584 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 EPHX4Q8IUS5 362 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 IGDCC3Q8IVU1 814 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 NLGN4XQ8N0W4 816 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 CBR4Q8N4T8 237 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 MFSD2AQ8NA29 543 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 KYQ8NBH2 561 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 GLB1L3Q8NCI6 653 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 RHOXF1Q8NHV9 184 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF516Q92618 1163 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 TBATAQ96M53 351 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 OSMRQ99650 979 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 ACO2Q99798 780 aaKnown RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 C16orf70Q9BSU1 422 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 KATNAL1Q9BW62 490 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 LRRC40Q9H9A6 602 aa9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 RBAKQ9NYW8 714 aaPredicted RBP9.29□□□□□ -0.92
SMARCAL1-202ENST00000358207 IQANK1A0A1B0GTG1 560 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PDZK1P1A8MUH7 402 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 NOS1APO75052 506 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF780AO75290 641 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TIPRLO75663 272 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms