RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SCIMPQ6UWF3 145 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 CLP1Q92989 425 aaKnown RBP17.57■□□□□ 0.4
NPAS3-202ENST00000356141 LRRC3BQ96PB8 259 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 RANBP9Q96S59 729 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 THTPAQ9BU02 230 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 A0A1B0GTL3 188 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 KRT87PA6NCN2 255 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 TARM1B6A8C7 271 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 MTX2O75431 263 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 OLFM2O95897 454 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 TYRP14679 529 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 CREB5Q02930 508 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 TSNQ15631 228 aaKnown RBP17.57■□□□□ 0.4
NPAS3-202ENST00000356141 AGAP9Q5VTM2 703 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 DET1Q7L5Y6 550 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 SFTPA1Q8IWL2 248 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 SAR1AQ9NR31 198 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 TDP1Q9NUW8 608 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 NLE1Q9NVX2 485 aaPredicted RBP17.57■□□□□ 0.4
NPAS3-202ENST00000356141 ANKRD6Q9Y2G4 727 aa17.57■□□□□ 0.4
NPAS3-202ENST00000356141 EFCAB14O75071 495 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 HNF1BP35680 557 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 AGTR2P50052 363 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 CLNS1AP54105 237 aaKnown RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 FRG1Q14331 258 aaKnown RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 PITRM1Q5JRX3 1037 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 RETSATQ6NUM9 610 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 CPNE9Q8IYJ1 553 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 SDR16C5Q8N3Y7 309 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 DTX3LQ8TDB6 740 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 SREK1Q8WXA9 508 aaKnown RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 LRMDAQ9H2I8 198 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 NKX1-2Q9UD57 310 aaPredicted RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 ZNF711Q9Y462 761 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 EIF4E1BA6NMX2 242 aaKnown RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 SUPT3HB4E1H0 165 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 SUPT3HO75486 399 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 ZNF821O75541 412 aaPredicted RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 PDE5AO76074 875 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 GFAPP14136 432 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 TAF1AQ15573 450 aaPredicted RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 ISCA2Q86U28 154 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 TEX9Q8N6V9 391 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 PTGR2Q8N8N7 351 aaPredicted RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 ZNF483Q8TF39 744 aaPredicted RBP17.56■□□□□ 0.4
NPAS3-202ENST00000356141 FAM161BQ96MY7 647 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 HBEGFQ99075 208 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 MCOLN1Q9GZU1 580 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 COMMD10Q9Y6G5 202 aa17.56■□□□□ 0.4
NPAS3-202ENST00000356141 BTN3A1O00481 513 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 PAPSS2O95340 614 aaPredicted RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 TRIM16O95361 564 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 CYBBP04839 570 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 SRCP12931 536 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 PTPN4P29074 926 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 PPP3CCP48454 512 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 MPPE1Q53F39 396 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 KLC3Q6P597 504 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 DPY19L3Q6ZPD9 716 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 ZNF398Q8TD17 642 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 EEF1AKMT1Q8WVE0 214 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 MRPL57Q9BQC6 102 aaKnown RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 CCDC106Q9BWC9 280 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 DENND2DQ9H6A0 471 aaPredicted RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 HSFX1Q9UBD0 423 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 MED16Q9Y2X0 877 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 PKP3Q9Y446 797 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 NPIPB15A6NHN6 443 aaPredicted RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 E5RI56 91 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 TPD52L2O43399 206 aaKnown RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 PRAMEF1O95521 474 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 CSRP3P50461 194 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 RPL14P50914 215 aaKnown RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 LSM12Q3MHD2 195 aaKnown RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 SEL1L3Q68CR1 1132 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 HTR3DQ70Z44 454 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 RNF148Q8N7C7 305 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 WDR60Q8WVS4 1066 aa17.55■□□□□ 0.4
NPAS3-202ENST00000356141 SEMA4BQ9NPR2 832 aaPredicted RBP17.55■□□□□ 0.4
NPAS3-202ENST00000356141 A0A087X1B8 175 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 CFAP73A6NFT4 308 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 UBFD1O14562 309 aaKnown RBP17.54■□□□□ 0.4
NPAS3-202ENST00000356141 TNK2Q07912 1038 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 KIAA0408Q6ZU52 694 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 FATE1Q969F0 183 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 BTBD10Q9BSF8 475 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 DRC3Q9H069 523 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 TCF7L2Q9NQB0 619 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 SPATS2LQ9NUQ6 558 aaKnown RBP17.54■□□□□ 0.4
NPAS3-202ENST00000356141 MRPS23Q9Y3D9 190 aaKnown RBP17.54■□□□□ 0.4
NPAS3-202ENST00000356141 OBSL1O75147 1896 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 GRID2O43424 1007 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 MGRN1O60291 552 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 GUCA1CO95843 209 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 EPOP01588 193 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 ZNF37AP17032 561 aaPredicted RBP17.54■□□□□ 0.4
NPAS3-202ENST00000356141 SLC7A9P82251 487 aa17.54■□□□□ 0.4
NPAS3-202ENST00000356141 KPNB1Q14974 876 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms