RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RPTNQ6XPR3 784 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC26A9Q7LBE3 791 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 PDSS2Q86YH6 399 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ENDOVQ8N8Q3 282 aaKnown RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 ABCG2Q9UNQ0 655 aa12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 OAS3Q9Y6K5 1087 aaKnown RBP12.68□□□□□ -0.38
SYNCRIP-201ENST00000355238 FOXO6A8MYZ6 492 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 H0Y858 1186 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TGFB1I1O43294 461 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 IFNGP01579 166 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 RAP2AP10114 183 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 GNPDA1P46926 289 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 POLR2LP62875 67 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 SMU1Q2TAY7 513 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 GPAT3Q53EU6 434 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 OR4A15Q8NGL6 344 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 FEM1AQ9BSK4 669 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 OSGEPL1Q9H4B0 414 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TOP3BO95985 862 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 HIST1H2ABP04908 130 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 NUMBP49757 651 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 USP45Q70EL2 814 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 HIST3H2AQ7L7L0 130 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TNFAIP8L1Q8WVP5 186 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 HIST1H2ACQ93077 130 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ASB8Q9H765 288 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 IFNA16P05015 189 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 MMP8P22894 467 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ALDH3A2P51648 485 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 CASP7P55210 303 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 GNA12Q03113 381 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 PTGES3Q15185 160 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 OR4L1Q8NH43 312 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 LINGO1Q96FE5 620 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 KCNS3Q9BQ31 491 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 CNOT6Q9ULM6 557 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 PRKAG1P54619 331 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 JAM2P57087 298 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZNF613Q6PF04 617 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLITRK4Q8IW52 837 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 SMG8Q8ND04 991 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 KBTBD7Q8WVZ9 684 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 MFSD14AQ96MC6 490 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 MTRRQ9UBK8 725 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ITGA3P26006 1051 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 CDKN2BP42772 138 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 MVKQ03426 396 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 PEX6Q13608 980 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TAF13Q15543 124 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 OR5K1Q8NHB7 308 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 VMP1Q96GC9 406 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZC3H10Q96K80 434 aaKnown RBP12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 CNPPD1Q9BV87 410 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 IGSF9Q9P2J2 1179 aa12.67□□□□□ -0.38
SYNCRIP-201ENST00000355238 TMEM150BA6NC51 233 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 METTL21EPA6NDL7 271 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 FGF1P05230 155 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 IQSEC1Q6DN90 963 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 OAFQ86UD1 273 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 COPS4Q9BT78 406 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 RNF38Q9H0F5 515 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ZDHHC18Q9NUE0 388 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 EIF3KQ9UBQ5 218 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ALDH4A1P30038 563 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 BACE1P56817 501 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ELAVL2Q12926 359 aaKnown RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PRKD1Q15139 912 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 NUP50Q9UKX7 468 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 FAM86C2PA6NEL3 165 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 QSOX1O00391 747 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CREB1P16220 341 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 ACADLP28330 430 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 SERPINA4P29622 427 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 AP5B1Q2VPB7 878 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 RFTN2Q52LD8 501 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 HDAC10Q969S8 669 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 CCDC177Q9NQR7 707 aaPredicted RBP12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PPM1HQ9ULR3 514 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 PLCL2Q9UPR0 1127 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 IQGAP1P46940 1657 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 OR6C70A6NIJ9 312 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 HOXA2O43364 376 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 KCNQ2O43526 872 aa12.66□□□□□ -0.38
SYNCRIP-201ENST00000355238 TNNI3P19429 210 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms