RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PNMA8BQ9ULN7 279 aaPredicted RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 ANKRD12Q6UB98 2062 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 TRPM7Q96QT4 1865 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 POMCP01189 267 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 UBL4AP11441 157 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 WARSP23381 471 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 ELK4P28324 431 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 FMO4P31512 558 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 BRCC3P46736 316 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 RPL34P49207 117 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 PSEN2P49810 448 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 RPL14P50914 215 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 NME5P56597 212 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CDH17Q12864 832 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CBLBQ13191 982 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 IMPG1Q17R60 797 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 FAM110CQ1W6H9 321 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CHSY3Q70JA7 882 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ZC3HC1Q86WB0 502 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 CEP97Q8IW35 865 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 SPERTQ8NA61 448 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 GLMNQ92990 594 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 TEKT5Q96M29 485 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 DEPDC7Q96QD5 511 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ADI1Q9BV57 179 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 PRRG3Q9BZD7 231 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 OXSMQ9NWU1 459 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 PKD2L2Q9NZM6 624 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 EGFL7Q9UHF1 273 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 KCNU1A8MYU2 1149 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 C9IYK1 514 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 HDAC3O15379 428 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 F2P00734 622 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 MPOP05164 745 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 KCNE1P15382 129 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 BMPR1AP36894 532 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 GJA9P57773 515 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 IFITM3Q01628 133 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ITKQ08881 620 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ZNF846Q147U1 533 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 NAPEPLDQ6IQ20 393 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 PLEKHH3Q7Z736 793 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ANKRD13BQ86YJ7 626 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 HM13Q8TCT9 377 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 MAGEE2Q8TD90 523 aaPredicted RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 MAGED4Q96JG8 741 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 IL22Q9GZX6 179 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 MUC3BQ9H195 1237 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 FAM96AQ9H5X1 160 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CCDC177Q9NQR7 707 aaPredicted RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ADAM28Q9UKQ2 775 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CNOT6Q9ULM6 557 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 PRSS51A0A1B0GVH4 220 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 E7ENX8 843 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 RAD51BO15315 384 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TBX1O43435 398 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 DLX3O60479 287 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 B3GAT3O94766 335 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ATP5BP06576 529 aaKnown RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 CXCR2P25025 360 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TUBA4AP68366 448 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TXNL4AP83876 142 aaKnown RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 CSHL1Q14406 222 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SPCS2Q15005 226 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 KCTD11Q693B1 232 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ZNF470Q6ECI4 717 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 FRA10AC1Q70Z53 315 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 LDB1Q86U70 411 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 TICAM1Q8IUC6 712 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 FLCNQ8NFG4 579 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 EXT2Q93063 718 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 ZNF419Q96HQ0 510 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 TMEM209Q96SK2 561 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 ACOT9Q9Y305 439 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 PCM1Q15154 2024 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 FAM95CA0A1B0GW59 222 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 PTGES3LE9PB15 166 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 H3BUI4 141 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 M0R3G1 203 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SNAP91O60641 907 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 DEAF1O75398 565 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 B3GALNT1O75752 331 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MYCP01106 439 aaPredicted RBP9.35□□□□□ -0.91
SMG6-202ENST00000354901 INHBBP09529 407 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SBK3P0C264 359 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CCDC159P0C7I6 412 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 MYL4P12829 197 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 PRKCAP17252 672 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
SMG6-202ENST00000354901 CRTC3Q6UUV7 619 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms