RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PRICKLE1Q96MT3 831 aaPredicted RBP22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 COPS7BQ9H9Q2 264 aaPredicted RBP22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 TMEM181Q9P2C4 612 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 TMCO1Q9UM00 188 aa22.17■■□□□ 1.14
NKX2-1-201ENST00000354822 ATP6AP2A0A1C7CYW4 349 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CLASP2O75122 1294 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ATP6AP2O75787 350 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 SIX3O95343 332 aaPredicted RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 TCN1P20061 433 aaPredicted RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 GPX3P22352 226 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 HSPA13P48723 471 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ALDH7A1P49419 539 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CLCN2P51788 898 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 LCP2Q13094 533 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 PDK3Q15120 406 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ANKS6Q68DC2 871 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ZNF783Q6ZMS7 281 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 TICAM1Q8IUC6 712 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 TSC22D3Q99576 134 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CD300AQ9UGN4 299 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 AFF4Q9UHB7 1163 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CNOT11Q9UKZ1 510 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 FAM50BQ9Y247 325 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 RAI2Q9Y5P3 530 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 OAS3Q9Y6K5 1087 aaKnown RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ANKRD66B4E2M5 251 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 ADAM12O43184 909 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 AP1G1O43747 822 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 F11P03951 625 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 KLKB1P03952 638 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 C8BP07358 591 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CLCQ05315 142 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 TCTN1Q2MV58 587 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 C8orf82Q6P1X6 216 aaPredicted RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 TXNDC11Q6PKC3 985 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 MARVELD2Q8N4S9 558 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 BCL7CQ8WUZ0 217 aaPredicted RBP22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 MYRFLQ96LU7 910 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 NSMCE3Q96MG7 304 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 KLHL32Q96NJ5 620 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 GCNAQ96QF7 691 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 CYP2S1Q96SQ9 504 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 NDUFAF1Q9Y375 327 aa22.16■■□□□ 1.14
NKX2-1-201ENST00000354822 SUPT3HB4E1H0 165 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 CBX4O00257 560 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 TXNDC9O14530 226 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 STX16O14662 325 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 VPS26AO75436 327 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 SUPT3HO75486 399 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 STAMBPO95630 424 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 CHN2P52757 468 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 RHDQ02161 417 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 KIF19Q2TAC6 998 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 SETMARQ53H47 684 aaPredicted RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 HOPXQ9BPY8 73 aaPredicted RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 C1QTNF3Q9BXJ4 246 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 MED16Q9Y2X0 877 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 COMMD10Q9Y6G5 202 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 EFEMP2O95967 443 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 ALDOCP09972 364 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 PRSS56P0CW18 603 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 HSPA8P11142 646 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 HMGA1P17096 107 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 LBPP18428 481 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 VEGFBP49765 207 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 CLCN4P51793 760 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 PTPRNQ16849 979 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 EFL1Q7Z2Z2 1120 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 FUNDC1Q8IVP5 155 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 MIER2Q8N344 545 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 LPCAT1Q8NF37 534 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 TRPC4APQ8TEL6 797 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 DUS3LQ96G46 650 aaKnown RBP22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 EXOC2Q96KP1 924 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 PKP2Q99959 881 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 MUC3BQ9H195 1237 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 PFDN4Q9NQP4 134 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 ANKRD36A6QL64 1941 aa22.15■■□□□ 1.14
NKX2-1-201ENST00000354822 PIP5K1BO14986 540 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 PKMP14618 531 aaKnown RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 ARSAP15289 507 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 EEF1DP29692 281 aaKnown RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 AARS2Q5JTZ9 985 aaKnown RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 RNF219Q5W0B1 726 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 PRMT9Q6P2P2 845 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 HERC6Q8IVU3 1022 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 LILRA2Q8N149 483 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 FAM156AQ8NDB6 213 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 CENPKQ9BS16 269 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 FBRSL1Q9HCM7 1045 aaKnown RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 AP4S1Q9Y587 144 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 A0A0J9YYE9 177 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 KLK8O60259 260 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 MATN4O95460 622 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 PPP3CCP48454 512 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 DDIASQ8IXT1 998 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 PHC3Q8NDX5 983 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 BIRC8Q96P09 236 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 GPR21Q99679 349 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms