RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 A0A087X0B3 334 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 SYNDIG1LA6NDD5 238 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 SULT1C2O00338 296 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 RAD17O75943 681 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 ARF4P18085 180 aaPredicted RBP12.58□□□□□ -0.4
COL6A3-203ENST00000353578 SSTR1P30872 391 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 MYBPC1Q00872 1141 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 TCEA2Q15560 299 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 HMGN3Q15651 99 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 ITPAQ9BY32 194 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
COL6A3-203ENST00000353578 LIASO43766 372 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 DNTTP04053 509 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 FAIM2Q9BWQ8 316 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 DNAJB9Q9UBS3 223 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ZNF214Q9UL59 606 aaPredicted RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 PRR5-ARHGAP8B1AHC4 643 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 AZIN1O14977 448 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 IFNA10P01566 189 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 IFNA4P05014 189 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RRM1P23921 792 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ARHGAP8P85298 464 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RFTN1Q14699 578 aaPredicted RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 GOLGA7BQ2TAP0 167 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TOMM5Q8N4H5 51 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RUSC1Q9BVN2 902 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ANKDD1AQ495B1 522 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 IQCCQ4KMZ1 466 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 HES5Q5TA89 166 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SNX27Q96L92 541 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 EBNA1BP2Q99848 306 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 WDCPQ9H6R7 721 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 MYO9BQ13459 2157 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 KDM6BO15054 1643 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 OR10H3O60404 316 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RFPL2O75678 378 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 CRY1Q16526 586 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 DCP2Q8IU60 420 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RHOJQ9H4E5 214 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 POLR1DQ9Y2S0 133 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SOX30O94993 753 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 HPRP00739 348 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RPL6Q02878 288 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 PCSK7Q16549 785 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 GCNT7Q6ZNI0 430 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 DPP9Q86TI2 863 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 RNF148Q8N7C7 305 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 CEP295NLQ96MC4 621 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TRPC4Q9UBN4 977 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TDP2O95551 362 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 CPSF4O95639 269 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 DCP1BQ8IZD4 617 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 MKRN2Q9H000 416 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TIPRLO75663 272 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 HMGCRP04035 888 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 EPB42P16452 691 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 AMPD1P23109 780 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 FBLN1P23142 703 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SOX11P35716 441 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TAS2R43P59537 309 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 SLC3A1Q07837 685 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 MPP7Q5T2T1 576 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 EMC10Q5UCC4 262 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 KLHL35Q6PF15 583 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 OR4A15Q8NGL6 344 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 GTF3C2Q8WUA4 911 aaPredicted RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 OSGEPQ9NPF4 335 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ZFP57Q9NU63 452 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 TCRBV9S1A1TA0A576 114 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 MZF1P28698 734 aaPredicted RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 MMAAQ8IVH4 418 aaKnown RBP12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ZNF283Q8N7M2 679 aa12.57□□□□□ -0.4
COL6A3-203ENST00000353578 ASB4Q9Y574 426 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms