RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 AGAP9Q5VTM2 703 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 GLYATQ6IB77 296 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 NEK5Q6P3R8 708 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SCIMPQ6UWF3 145 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LCLAT1Q6UWP7 414 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PDZD4Q76G19 769 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SPATC1Q76KD6 591 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ABI1Q8IZP0 508 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 HS3ST5Q8IZT8 346 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LEMD2Q8NC56 503 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 OR6Q1Q8NGQ2 317 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ITFG1Q8TB96 612 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MCOLN3Q8TDD5 553 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ISL2Q96A47 359 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 C3orf30Q96M34 536 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SH3GL1Q99961 368 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 FEM1AQ9BSK4 669 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 IRF2BPLQ9H1B7 796 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SCUBE2Q9NQ36 999 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ADPRHL2Q9NX46 363 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 NSMCE4AQ9NXX6 385 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 AASSQ9UDR5 926 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 RIPK3Q9Y572 518 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ORC6Q9Y5N6 252 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 U3KQV3 271 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MAGEB16A2A368 324 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TRIM64A6NGJ6 449 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 GOLGA8CPA6NN73 597 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CENPXA8MT69 81 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 BBIP1A8MTZ0 92 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 SLC22A1O15245 554 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 MSCO60682 206 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 FADS2O95864 444 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ALDOCP09972 364 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ITIH1P19827 911 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ENDOUP21128 410 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 FSHRP23945 695 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 PTPN3P26045 913 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ATICP31939 592 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 BMPR1AP36894 532 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 NPY2RP49146 381 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ALDH3A2P51648 485 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 YWHAHQ04917 246 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 LAMTOR4Q0VGL1 99 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CBLBQ13191 982 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 GRB7Q14451 532 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 PSMD5Q16401 504 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 HIST2H2ACQ16777 129 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 SOWAHAQ2M3V2 549 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 WDR45BQ5MNZ6 344 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 DACT2Q5SW24 774 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 SLC16A12Q6ZSM3 486 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TFAP2DQ7Z6R9 452 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 DEPDC4Q8N2C3 294 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ASCC1Q8N9N2 400 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ATG4CQ96DT6 458 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CDHR1Q96JP9 859 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 GAD1Q99259 594 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 BCO2Q9BYV7 579 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 SETD4Q9NVD3 440 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 DNMT3BQ9UBC3 853 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TESMINQ9Y4I5 508 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 FTH1P02794 183 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ASNSP08243 561 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 PRKACGP22612 351 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 HOXA10P31260 410 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 FMO3P31513 532 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 S100A5P33763 92 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TGFBR1P36897 503 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CASP3P42574 277 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ST13P50502 369 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 PPP5CP53041 499 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CD47Q08722 323 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CDH17Q12864 832 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TRAF3Q13114 568 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TRIP4Q15650 581 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ZFP69Q49AA0 526 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 FBXO48Q5FWF7 155 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 SNAP47Q5SQN1 464 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ARHGAP17Q68EM7 881 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 ESRP1Q6NXG1 681 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 C11orf74Q86VG3 221 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 DEFB106AQ8N104 65 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 OR13J1Q8NGT2 312 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CNIH3Q8TBE1 160 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 HDAC2Q92769 488 aaKnown RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CCDC126Q96EE4 140 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 GREB1LQ9C091 1923 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-201ENST00000352993 DSN1Q9H410 356 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 CPNE5Q9HCH3 593 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 IL37Q9NZH6 218 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 PCDHGA11Q9Y5H2 935 aa7.61□□□□□ -1.19
BRCA1-201ENST00000352993 TBKBP1A7MCY6 615 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 M0QYT0 321 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 DPYSL4O14531 572 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CHRNA1P02708 482 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 FYNP06241 537 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CCDC159P0C7I6 412 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 STAG3L1P0CL83 205 aa7.6□□□□□ -1.19
BRCA1-201ENST00000352993 CYP4B1P13584 511 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms