RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 IMPAD1Q9NX62 359 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 RAP2CQ9Y3L5 183 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 OTCP00480 354 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 IFNA16P05015 189 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 RHOP08100 348 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 EPORP19235 508 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 LIMK2P53671 638 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 C15orf39Q6ZRI6 1047 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 PQLC3Q8N755 202 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 H2AFY2Q9P0M6 372 aaPredicted RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 TJP1Q07157 1748 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 ZNF839A8K0R7 811 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 QSOX1O00391 747 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 PFKMP08237 780 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 ANXA11P50995 505 aaKnown RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 NEK3P51956 506 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 SF1Q15637 639 aaKnown RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 KRT78Q8N1N4 520 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 ATG16L2Q8NAA4 619 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 BPIFB1Q8TDL5 484 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 TEKT2Q9UIF3 430 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 INVSQ9Y283 1065 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 PROZP22891 400 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 MSX2P35548 267 aaPredicted RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 CRATP43155 626 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 CCT8P50990 548 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 ZNF132P52740 706 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 PDGFRLQ15198 375 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 TSNQ15631 228 aaKnown RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 RAB30Q15771 203 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 CARD16Q5EG05 197 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 TSSK3Q96PN8 268 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 OR2AG1Q9H205 316 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 EXOSC4Q9NPD3 245 aaKnown RBP13.66□□□□□ -0.22
SMC6-201ENST00000351948 TMEM216Q9P0N5 145 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 GGA2Q9UJY4 613 aa13.66□□□□□ -0.22
SMC6-201ENST00000351948 CA3P07451 260 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 C21orf59P57076 290 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 DRICH1Q6PGQ1 229 aaPredicted RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 HID1Q8IV36 788 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ZNF786Q8N393 782 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ENTPD4Q9Y227 616 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 RBM47A0AV96 593 aaKnown RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 ILVBLA1L0T0 632 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 CCR4P51679 360 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 IRF5Q13568 498 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SPIDRQ14159 915 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 QPCTQ16769 361 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ACDQ96AP0 544 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 FCRL5Q96RD9 977 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 STRA6Q9BX79 667 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SEMA6AQ9H2E6 1030 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SUV39H2Q9H5I1 410 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 KCTD5Q9NXV2 234 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 COPG2Q9UBF2 871 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ZW10O43264 779 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SCNN1AP37088 669 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 HPCAL1P37235 193 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 RPIAP49247 311 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 NTHL1P78549 312 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 RIN3Q8TB24 985 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SCHIP1Q9P0W5 487 aaPredicted RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 TMCC3Q9ULS5 477 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 UBXN8O00124 270 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 NDUFB5O43674 189 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 NUDT14O95848 222 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 DRD4P21917 467 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 VHLP40337 213 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 USP46P62068 366 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SIRPB2Q5JXA9 342 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ADGRD1Q6QNK2 874 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 ARCQ7LC44 396 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
SMC6-201ENST00000351948 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 FBXO30Q8TB52 745 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 SLC27A6Q9Y2P4 619 aa13.65□□□□□ -0.22
SMC6-201ENST00000351948 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 NEMP2A6NFY4 417 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
SMC6-201ENST00000351948 SLC20A2Q08357 652 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 GCNT7Q6ZNI0 430 aa13.64□□□□□ -0.23
SMC6-201ENST00000351948 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms