RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FOXN2P32314 431 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 IDH3AP50213 366 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 POLR2JP52435 117 aaKnown RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 GNA13Q14344 377 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 TXNRD3NBQ6F5E7 133 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 RBM23Q86U06 439 aaKnown RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 TMEM199Q8N511 208 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 PNPT1Q8TCS8 783 aaKnown RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 STYXQ8WUJ0 223 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 AARSD1Q9BTE6 412 aaKnown RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 FAIM2Q9BWQ8 316 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 SLC17A6Q9P2U8 582 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 FBXW11Q9UKB1 542 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 CORO1CQ9ULV4 474 aaPredicted RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 CORO2BQ9UQ03 480 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 TCRBV7S3A2A0A539 114 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 METTL18O95568 372 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 DBTP11182 482 aaKnown RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 CTSEP14091 401 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 SLC5A9Q2M3M2 681 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.97■□□□□ 0.15
PTPN11-201ENST00000351677 SLC25A51Q9H1U9 297 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF232Q9UNY5 417 aa15.97■□□□□ 0.15
PTPN11-201ENST00000351677 LSM12Q3MHD2 195 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 C6orf52Q5T4I8 152 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 TMC5Q6UXY8 1006 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 CCDC28BQ9BUN5 200 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 SSU72Q9NP77 194 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 CENPXA8MT69 81 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 MFN2O95140 757 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 WARSP23381 471 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 TRIM71Q2Q1W2 868 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 PLA2G4EQ3MJ16 856 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 PERM1Q5SV97 790 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 PAGE2Q7Z2X7 111 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 RAVER1Q8IY67 606 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 LPGAT1Q92604 370 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 APOLD1Q96LR9 279 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 GATA5Q9BWX5 397 aaPredicted RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 CIDEBQ9UHD4 219 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 IQCF5A8MTL0 148 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 OR6B1O95007 311 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 AQP1P29972 269 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 GPD2P43304 727 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 RIPK1Q13546 671 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 ZNF544Q6NX49 715 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 MPP5Q8N3R9 675 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 C2orf73Q8N5S3 287 aaPredicted RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 AHCYL2Q96HN2 611 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 FERD3LQ96RJ6 166 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 TNKS2Q9H2K2 1166 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 MAGEL2Q9UJ55 1249 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 MCM8Q9UJA3 840 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 SATB2Q9UPW6 733 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 GOT2P00505 430 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 UGT2B4P06133 528 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 RALGPS1Q5JS13 557 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 TAPT1Q6NXT6 567 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 PSMG2Q969U7 264 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 DNAJC1Q96KC8 554 aaKnown RBP15.96■□□□□ 0.15
PTPN11-201ENST00000351677 HIPK3Q9H422 1215 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 N6AMT1Q9Y5N5 214 aa15.96■□□□□ 0.15
PTPN11-201ENST00000351677 NBNO60934 754 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 ITGA2P17301 1181 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 TLX1P31314 330 aaPredicted RBP15.96■□□□□ 0.14
PTPN11-201ENST00000351677 SP2Q02086 613 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 TIMM50Q3ZCQ8 353 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 REP15Q6BDI9 236 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 KIAA1324Q6UXG2 1013 aaKnown RBP15.96■□□□□ 0.14
PTPN11-201ENST00000351677 FAM20CQ8IXL6 584 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 SPACA7Q96KW9 195 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 DEFB118Q96PH6 123 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 HBEGFQ99075 208 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 SGK2Q9HBY8 427 aa15.96■□□□□ 0.14
PTPN11-201ENST00000351677 DUOX1Q9NRD9 1551 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 MT-ND1P03886 318 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ENO2P09104 434 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 GLUD2P49448 558 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 GLYATQ6IB77 296 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 C16orf62Q7Z3J2 963 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF624Q9P2J8 865 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PARP4Q9UKK3 1724 aaKnown RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 OR10H3O60404 316 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ENPEPQ07075 957 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 KHDC1Q4VXA5 237 aaKnown RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 C11orf88Q6PI97 169 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 KLHL17Q6TDP4 642 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PIGWQ7Z7B1 504 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ZFP28Q8NHY6 868 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 HEXDCQ8WVB3 486 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 SHISA4Q96DD7 197 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 CXorf40BQ96DE9 158 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 CLIP3Q96DZ5 547 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 OSBPL6Q9BZF3 934 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 A0A0G2JLL6 359 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ITGA1P56199 1179 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 NR1D2Q14995 579 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PLPP4Q5VZY2 271 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms