RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 BRAT1Q6PJG6 821 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 SIGLEC10Q96LC7 697 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 THUMPD3Q9BV44 507 aaKnown RBP12.12□□□□□ -0.47
SMAD9-201ENST00000350148 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
SMAD9-201ENST00000350148 TRIM39Q9HCM9 518 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 IL1BP01584 269 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 FAM151BQ6UXP7 276 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 SNX20Q7Z614 316 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 PHOSPHO2Q8TCD6 241 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 CASD1Q96PB1 797 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 C6orf203Q9P0P8 240 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-201ENST00000350148 CCDC154A6NI56 674 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 FOXO6A8MYZ6 492 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 H0YGN5 161 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 ME2P23368 584 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 HPCAL1P37235 193 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 ABCG1P45844 678 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 PKNOX1P55347 436 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 BTKQ06187 659 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 CDC16Q13042 620 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 TRIP10Q15642 601 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 INO80DQ53TQ3 878 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-201ENST00000350148 WLSQ5T9L3 541 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 HEATR4Q86WZ0 1026 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-201ENST00000350148 TCEAL8Q8IYN2 117 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 POPDC3Q9HBV1 291 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 TMEM216Q9P0N5 145 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
SMAD9-201ENST00000350148 COL4A5P29400 1685 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 C16orf96A6NNT2 1141 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ATG13O75143 517 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DNTTP04053 509 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 UGT2B4P06133 528 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PCNAP12004 261 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DEFA1P59665 94 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DEFA3P59666 94 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SKP1P63208 163 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 FAM189BP81408 668 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 LDLRAP1Q5SW96 308 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PIWIL1Q96J94 861 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 NLNQ9BYT8 704 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 TDP1Q9NUW8 608 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PRPF19Q9UMS4 504 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 AHCYL1O43865 530 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SOCS5O75159 536 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PIRTP0C851 137 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 IDO1P14902 403 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ZNF30P17039 623 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 NSG1P42857 185 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 RPS24P62847 133 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 IRF8Q02556 426 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SLC10A7Q0GE19 358 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 GET4Q7L5D6 327 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 CNBD2Q96M20 576 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 TMEM209Q96SK2 561 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 NUSAP1Q9BXS6 441 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 BLOC1S6Q9UL45 172 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 CTSAP10619 480 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 VAV1P15498 845 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 FSHRP23945 695 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ECT2LQ008S8 904 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 CHRNB3Q05901 458 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 IL27RAQ6UWB1 636 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 NET1Q7Z628 596 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 CENPLQ8N0S6 344 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ZNF514Q96K75 400 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 MCCC1Q96RQ3 725 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SLC2A11Q9BYW1 496 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 A0A088AWK7 358 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 TCRBV7S3A2A0A539 114 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SEC22BO75396 215 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 S100A1P23297 94 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 GATMP50440 423 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 KCNQ1P51787 676 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 GPX6P59796 221 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DDX39BQ13838 428 aaKnown RBP12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 SNX32Q86XE0 403 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 PHYKPLQ8IUZ5 450 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 IL12RB2Q99665 862 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 USP3Q9Y6I4 520 aa12.11□□□□□ -0.47
SMAD9-201ENST00000350148 DCXO43602 365 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms