RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TTPAP49638 278 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 CDKN1CP49918 316 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ATP6V0D1P61421 351 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ERVK-21P61565 698 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SNRPD1P62314 119 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 NTHL1P78549 312 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ARHGAP8P85298 464 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SULT2A1Q06520 285 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MYLK3Q32MK0 819 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 UNC50Q53HI1 259 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 AARS2Q5JTZ9 985 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 CTSL3PQ5NE16 218 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 VWA5B1Q5TIE3 1220 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 C22orf39Q6P5X5 142 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 CERS6Q6ZMG9 384 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 RINLQ6ZS11 566 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ADIPOR2Q86V24 386 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZSWIM9Q86XI8 627 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ADGRG2Q8IZP9 1017 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 STK40Q8N2I9 435 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 CPSF7Q8N684 471 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 PCDH20Q8N6Y1 951 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 EFHBQ8N7U6 833 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 FAM13CQ8NE31 585 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 BHMTQ93088 406 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 KIAA1191Q96A73 305 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MOCOSQ96EN8 888 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SGF29Q96ES7 293 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZSWIM3Q96MP5 696 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF641Q96N77 438 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 RILPQ96NA2 401 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 MCCC1Q96RQ3 725 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ATOH8Q96SQ7 321 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 BTBD10Q9BSF8 475 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 TRMOQ9BU70 441 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 CADM1Q9BY67 442 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SLC2A11Q9BYW1 496 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 UNKQ9C0B0 810 aaKnown RBP6.89□□□□□ -1.31
TRIM55-203ENST00000350034 LINC00597Q9H2U6 94 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 GSTO2Q9H4Y5 243 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 POMKQ9H5K3 350 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZNF385DQ9H6B1 395 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ATP13A3Q9H7F0 1226 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SYTL2Q9HCH5 934 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 SPHK2Q9NRA0 654 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 TAS2R13Q9NYV9 303 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 TAS2R1Q9NYW7 299 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 NCKIPSDQ9NZQ3 722 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 ZDHHC2Q9UIJ5 367 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 DENND4CQ5VZ89 1909 aa6.89□□□□□ -1.31
TRIM55-203ENST00000350034 BDP1A6H8Y1 2624 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 MIA3Q5JRA6 1907 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 A0A0U1RQS6 177 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 A0A1W2PQ67 120 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 TSPAN11A1L157 253 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SPECC1L-ADORA2AF8WAN1 911 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SLC9A3R1O14745 358 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PFDN6O15212 129 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SLC22A2O15244 555 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 OR1I1O60431 355 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 MAGEC1O60732 1142 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 DIAPH2O60879 1101 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 KERAO60938 352 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SRP72O76094 671 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 RHOBTB1O94844 696 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 POP4O95707 220 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SLC4A1P02730 911 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ESR1P03372 595 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PYGLP06737 847 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ALPIP09923 528 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CISD3P0C7P0 127 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 TPBGLP0DKB5 382 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 BMP1P13497 986 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 TYRP14679 529 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 MYOGP15173 224 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SYN1P17600 705 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CEBPBP17676 345 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CTPS1P17812 591 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SERPINA4P29622 427 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 FMO4P31512 558 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 GKP32189 559 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CA5AP35218 305 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 HNF1BP35680 557 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 STK19P49842 368 aaPredicted RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 EPHB1P54762 984 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 ALDH18A1P54886 795 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 INHBCP55103 352 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 HERVK_113P63132 956 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SATB1Q01826 763 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 UBAP2LQ14157 1087 aaKnown RBP6.88□□□□□ -1.31
TRIM55-203ENST00000350034 NAA25Q14CX7 972 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 OR4D1Q15615 310 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 PTPRNQ16849 979 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 SLC9B1Q4ZJI4 515 aa6.88□□□□□ -1.31
TRIM55-203ENST00000350034 CARD16Q5EG05 197 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms