RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 RNF38Q9H0F5 515 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 FAM96AQ9H5X1 160 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 PARVBQ9HBI1 364 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 SMPD4Q9NXE4 827 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
COPS7B-201ENST00000350033 VWA7Q9Y334 891 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 CEPT1Q9Y6K0 416 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 PDE4DIPQ5VU43 2346 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 C2orf78A6NCI8 922 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
COPS7B-201ENST00000350033 BMP1P13497 986 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 NR1H2P55055 460 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 TIAL1Q01085 375 aaKnown RBP eCLIP13.4□□□□□ -0.26
COPS7B-201ENST00000350033 GNA12Q03113 381 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 FOLH1Q04609 750 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 USP41Q3LFD5 358 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 KCTD21Q4G0X4 260 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 AHI1Q8N157 1196 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
COPS7B-201ENST00000350033 NDEL1Q9GZM8 345 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 RSL24D1Q9UHA3 163 aaKnown RBP13.4□□□□□ -0.26
COPS7B-201ENST00000350033 ITM2BQ9Y287 266 aa13.4□□□□□ -0.26
COPS7B-201ENST00000350033 LRRC14BA6NHZ5 514 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 H3BNC9 293 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 H7C4K7 107 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 PEX1O43933 1283 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 KDM1AO60341 852 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 TNFAIP8O95379 198 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 EIF2S1P05198 315 aaKnown RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 LTA4HP09960 611 aaKnown RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 OCM2P0CE71 109 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 OCMP0CE72 109 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 COL6A1P12109 1028 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 MYL4P12829 197 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ATP5F1P24539 256 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ENTPD1P49961 510 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 RING1Q06587 406 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 APOFQ13790 326 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 FAM83EQ2M2I3 478 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 FBXO48Q5FWF7 155 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 FSCBQ5H9T9 825 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CALML6Q8TD86 181 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ZNF296Q8WUU4 475 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 PTERQ96BW5 349 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 QPCTLQ9NXS2 382 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CDYLQ9Y232 598 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ZNF840PA6NDX5 716 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 MAPKAPK2P49137 400 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CDKN1CP49918 316 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-201ENST00000350033 NUDT2P50583 147 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CLCN5P51795 746 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 PLD1Q13393 1074 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CCNIQ14094 377 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 PPP1R3AQ16821 1122 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 LRRC36Q1X8D7 754 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 KIAA0408Q6ZU52 694 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ICA1LQ8NDH6 482 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 DDHD1Q8NEL9 900 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 GDPD5Q8WTR4 605 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 FATE1Q969F0 183 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 Q9H521 79 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 NCKIPSDQ9NZQ3 722 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 PADI4Q9UM07 663 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 NOX1Q9Y5S8 564 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
COPS7B-201ENST00000350033 ANKRD36A6QL64 1941 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 CBX4O00257 560 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 PPP6CO00743 305 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 CD3EAPO15446 510 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 SLC7A4O43246 635 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 BAIAP3O94812 1187 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 HMGA1P17096 107 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 POLD2P49005 469 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 ALDH7A1P49419 539 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 EIF2B2P49770 351 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 NUP107P57740 925 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 LPCAT4Q643R3 524 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 CLEC6AQ6EIG7 209 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 RNF111Q6ZNA4 994 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 DCDC5Q6ZRR9 648 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 RNF148Q8N7C7 305 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 ACTRT2Q8TDY3 377 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 UBXN10Q96LJ8 280 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 DEFB118Q96PH6 123 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 PCDHGC4Q9Y5F7 938 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 FAM47E-STBD1D6RA91 191 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 UBFD1O14562 309 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 CNOT3O75175 753 aaKnown RBP13.38□□□□□ -0.27
COPS7B-201ENST00000350033 STC2O76061 302 aa13.38□□□□□ -0.27
COPS7B-201ENST00000350033 PAPSS2O95340 614 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms