RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 COL27A1Q8IZC6 1860 aaPredicted RBP21.98■■□□□ 1.11
SNX3-202ENST00000349379 YY2O15391 372 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 METTL18O95568 372 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 IVLP07476 585 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 CKMT1AP12532 417 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 BPIP17213 487 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 TNNT3P45378 269 aaPredicted RBP21.97■■□□□ 1.11
SNX3-202ENST00000349379 MSLNQ13421 630 aaPredicted RBP21.97■■□□□ 1.11
SNX3-202ENST00000349379 OLIG2Q13516 323 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 ELOCQ15369 112 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 DEFB133Q30KQ1 61 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 HS1BP3Q53T59 392 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 DRICH1Q6PGQ1 229 aaPredicted RBP21.97■■□□□ 1.11
SNX3-202ENST00000349379 LVRNQ6Q4G3 990 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 ARHGEF18Q6ZSZ5 1173 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 C1orf54Q8WWF1 131 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 HIC2Q96JB3 615 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 ARNT2Q9HBZ2 717 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 CYP4F12Q9HCS2 524 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 ANGPTL2Q9UKU9 493 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 ZKSCAN5Q9Y2L8 839 aa21.97■■□□□ 1.11
SNX3-202ENST00000349379 FAM221BA6H8Z2 402 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 HYAL3O43820 417 aaPredicted RBP21.96■■□□□ 1.11
SNX3-202ENST00000349379 FGGP02679 453 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 CTSEP14091 401 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 ILKQ13418 452 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 CCNG2Q16589 344 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 C6orf132Q5T0Z8 1188 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 DENND5AQ6IQ26 1287 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 CHCHD4Q8N4Q1 142 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 PTCD2Q8WV60 388 aaKnown RBP21.96■■□□□ 1.11
SNX3-202ENST00000349379 PLEKHG4BQ96PX9 1271 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 IL17CQ9P0M4 197 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 KNTC1P50748 2209 aa21.96■■□□□ 1.11
SNX3-202ENST00000349379 RFPL3O75679 317 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 SLC4A1P02730 911 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 ANXA6P08133 673 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 CXCR5P32302 372 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 PDPK2PQ6A1A2 396 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 TRIM74Q86UV6 250 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 SLC35F6Q8N357 371 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 RASGEF1CQ8N431 466 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 TRAM1L1Q8N609 369 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 DTX3LQ8TDB6 740 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 MAIP1Q8WWC4 291 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 ZSCAN5AQ9BUG6 496 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 SCNM1Q9BWG6 230 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 TMEM168Q9H0V1 697 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 TRNAU1APQ9NX07 287 aaKnown RBP21.95■■□□□ 1.1
SNX3-202ENST00000349379 TRMT1Q9NXH9 659 aaKnown RBP21.95■■□□□ 1.1
SNX3-202ENST00000349379 SUFUQ9UMX1 484 aa21.95■■□□□ 1.1
SNX3-202ENST00000349379 OAS3Q9Y6K5 1087 aaKnown RBP21.95■■□□□ 1.1
SNX3-202ENST00000349379 INPP4BO15327 924 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 CEP104O60308 925 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 CDK4P11802 303 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 POLD2P49005 469 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 DAB2P98082 770 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 ZNF569Q5MCW4 686 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 GLT6D1Q7Z4J2 308 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 GKN2Q86XP6 184 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 BLOC1S5Q8TDH9 187 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 TBL1YQ9BQ87 522 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 APOL2Q9BQE5 337 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 CARS2Q9HA77 564 aaKnown RBP21.94■■□□□ 1.1
SNX3-202ENST00000349379 NCKIPSDQ9NZQ3 722 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 VPS18Q9P253 973 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 FEZ2Q9UHY8 353 aaPredicted RBP21.94■■□□□ 1.1
SNX3-202ENST00000349379 ZNF148Q9UQR1 794 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 DRG1Q9Y295 367 aaKnown RBP21.94■■□□□ 1.1
SNX3-202ENST00000349379 NEUROG3Q9Y4Z2 214 aa21.94■■□□□ 1.1
SNX3-202ENST00000349379 USP27XA6NNY8 438 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 SNX1Q13596 522 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 SMAD1Q15797 465 aaKnown RBP21.93■■□□□ 1.1
SNX3-202ENST00000349379 ALS2CLQ60I27 953 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 TMPRSS7Q7RTY8 843 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 SLC35F3Q8IY50 421 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 CCL4L1Q8NHW4 92 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 GPBAR1Q8TDU6 330 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 PBKQ96KB5 322 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 SPATA16Q9BXB7 569 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 BPIFA1Q9NP55 256 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 KLK13Q9UKR3 277 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 TTC7AQ9ULT0 858 aaPredicted RBP21.93■■□□□ 1.1
SNX3-202ENST00000349379 TMEM98Q9Y2Y6 226 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 ST14Q9Y5Y6 855 aa21.93■■□□□ 1.1
SNX3-202ENST00000349379 EME2A4GXA9 379 aaPredicted RBP21.92■■□□□ 1.1
SNX3-202ENST00000349379 USP12O75317 370 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 AP2A1O95782 977 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 ATP1A1P05023 1023 aaKnown RBP21.92■■□□□ 1.1
SNX3-202ENST00000349379 MYF5P13349 255 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 SPINK2P20155 84 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 GNPDA1P46926 289 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 DUSP3P51452 185 aaPredicted RBP21.92■■□□□ 1.1
SNX3-202ENST00000349379 SPARCL1Q14515 664 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 ZDHHC20Q5W0Z9 365 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 DOK6Q6PKX4 331 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 DHRS13Q6UX07 377 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 NRROSQ86YC3 692 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 GLIS1Q8NBF1 620 aa21.92■■□□□ 1.1
SNX3-202ENST00000349379 VPS35Q96QK1 796 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms