RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CRTAMO95727 393 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CES1P23141 567 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 MAGEA12P43365 314 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 MAPKAPK2P49137 400 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 FOXA1P55317 472 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ARF5P84085 180 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 TMED1Q13445 227 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 CYLC2Q14093 348 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
TRIM4-201ENST00000349062 IYDQ6PHW0 289 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 LYSMD3Q7Z3D4 306 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 IFNEQ86WN2 208 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 ATP6V1E2Q96A05 226 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 SPATA17Q96L03 361 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 DNAJC28Q9NX36 388 aa13.86□□□□□ -0.19
TRIM4-201ENST00000349062 A0A088AWK7 358 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 HLA-DPA1P20036 260 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 PAX3P23760 479 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MRPS22P82650 360 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 RBBP7Q16576 425 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 PLA2G4EQ3MJ16 856 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SGO1Q5FBB7 561 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 TECRLQ5HYJ1 363 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 ING5Q8WYH8 240 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CD274Q9NZQ7 290 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 VPS51Q9UID3 782 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 INSL5Q9Y5Q6 135 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MYLKQ15746 1914 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 A0A087X1B8 175 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 C1orf232A0A0U1RR37 186 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MYOCOSA0A1B0GUC4 107 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SLC7A4O43246 635 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CXCL14O95715 111 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SOD2P04179 222 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 PEX2P28328 305 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 HTR7P34969 479 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 KPNA2P52292 529 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 KPNA1P52294 538 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 AQP4P55087 323 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MAP7Q14244 749 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SFT2D3Q587I9 215 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CYP2R1Q6VVX0 501 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 DET1Q7L5Y6 550 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MRPS31Q92665 395 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 TUBGCP3Q96CW5 907 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 GALNT8Q9NY28 637 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SPG21Q9NZD8 308 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CD84Q9UIB8 345 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 COPG1Q9Y678 874 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SLC30A1Q9Y6M5 507 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 PTPRDP23468 1912 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 A0A1B0GTL3 188 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 LEPRP48357 1165 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 SULT2A1Q06520 285 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 RING1Q06587 406 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 ISCA2Q86U28 154 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 ACOX2Q99424 681 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 MFSD1Q9H3U5 465 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 CERS4Q9HA82 394 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 GMPR2Q9P2T1 348 aaKnown RBP13.85□□□□□ -0.19
TRIM4-201ENST00000349062 APPL1Q9UKG1 709 aa13.85□□□□□ -0.19
TRIM4-201ENST00000349062 LOC285095A0A1B0GVY8 99 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 TMEM114B3SHH9 223 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 TBC1D4O60343 1298 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 EEF1DP29692 281 aaKnown RBP13.84□□□□□ -0.19
TRIM4-201ENST00000349062 TBC1D25Q3MII6 688 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 CACUL1Q86Y37 369 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 KDM1BQ8NB78 822 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 OR6Y1Q8NGX8 325 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 GDPD5Q8WTR4 605 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 PSKH2Q96QS6 385 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 C1orf50Q9BV19 199 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 MTG2Q9H4K7 406 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 TRAF6Q9Y4K3 522 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 V9GYQ6 96 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 FAM92AA1XBS5 289 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 ANKRD66B4E2M5 251 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 PER2O15055 1255 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 IGLV3-27P01718 113 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 RBP1P09455 135 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 AOC1P19801 751 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 PAOXQ6QHF9 649 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 GALNT4Q8N4A0 578 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 DRAXINQ8NBI3 349 aaPredicted RBP13.84□□□□□ -0.19
TRIM4-201ENST00000349062 ZFAND2BQ8WV99 257 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 FEM1CQ96JP0 617 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 FEM1AQ9BSK4 669 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 BOCQ9BWV1 1114 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 CCL26Q9Y258 94 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 PKP3Q9Y446 797 aa13.84□□□□□ -0.19
TRIM4-201ENST00000349062 UBFD1O14562 309 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms