RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ELNP15502 786 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 TCF3P15923 654 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 NPY2RP49146 381 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 NT5DC4Q86YG4 428 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 PDSS2Q86YH6 399 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 TMEM161BQ8NDZ6 487 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 WNT8BQ93098 351 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 CPNE1Q99829 537 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 CADM1Q9BY67 442 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 NCKAP1Q9Y2A7 1128 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 MAFO75444 373 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 CLPXO76031 633 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP2A6P11509 494 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 MAMLD1Q13495 774 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 RGMBQ6NW40 437 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 MILR1Q7Z6M3 343 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 TMEM17Q86X19 198 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 RGL4Q8IZJ4 473 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 FBXL16Q8N461 479 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 OR5B17Q8NGF7 314 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 VCPIP1Q96JH7 1222 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 GLS2Q9UI32 602 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 PPLO60437 1756 aa11.07□□□□□ -0.64
SMARCE1-202ENST00000348513 BTBD19C9JJ37 291 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SLCO1B7G3V0H7 640 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ITM2AO43736 263 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TRUB2O95900 331 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ETV5P41161 510 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 MPP2Q14168 576 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CACTIN-AS1Q8N1I8 211 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 C3orf58Q8NDZ4 430 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 FBXO30Q8TB52 745 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 OMDQ99983 421 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TCF7L2Q9NQB0 619 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PAQR5Q9NXK6 330 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SLC15A5A6NIM6 579 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 NUAK1O60285 661 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 HDCP19113 662 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ATP12AP54707 1039 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PFKPQ01813 784 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SLC41A1Q8IVJ1 513 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM20CQ8IXL6 584 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TCTEX1D2Q8WW35 142 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CLP1Q92989 425 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 MYDGFQ969H8 173 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 C12orf43Q96C57 262 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 POLR1EQ9GZS1 481 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 MAP10Q9P2G4 905 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 MAB21L2Q9Y586 359 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 MTA2O94776 668 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SERPINA6P08185 405 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TCF4P15884 667 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 RPA3P35244 121 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 RORAP35398 523 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TGM3Q08188 693 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ATG16L2Q8NAA4 619 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TRPV1Q8NER1 839 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF431Q8TF32 576 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 NACC2Q96BF6 587 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 EXOC2Q96KP1 924 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 BBS4Q96RK4 519 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 KRCC1Q9NPI7 259 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SEMA4BQ9NPR2 832 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRMT8Q9NR22 394 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 THAP1Q9NVV9 213 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRPF19Q9UMS4 504 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TNFSF13BQ9Y275 285 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ARHGAP23Q9P227 1491 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRAMEF33A0A0G2JMD5 474 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TRIM38O00635 465 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRAMEF10O60809 474 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ATG7O95352 703 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 NOS2P35228 1153 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRKAA2P54646 552 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PRKAA1Q13131 559 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SAMD4BQ5PRF9 694 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP2R1Q6VVX0 501 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP4Z1Q86W10 505 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 LZTR1Q8N653 840 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 WDSUB1Q8N9V3 476 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CRELD1Q96HD1 420 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 CCNB1IP1Q9NPC3 277 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ACTR3BQ9P1U1 418 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 PIRTP0C851 137 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 E2F2Q14209 437 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 ECM1Q16610 540 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 IQCKQ8N0W5 287 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 TMEM199Q8N511 208 aa11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SRFBP1Q8NEF9 429 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-202ENST00000348513 SPPL2AQ8TCT8 520 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms