RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 INSIG1O15503 277 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SEPT4O43236 478 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 AP1G1O43747 822 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PRKAR2AP13861 404 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 RHOQP17081 205 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 NDST2P52849 883 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 TSPY1Q01534 308 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 IKBKEQ14164 716 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SLC5A9Q2M3M2 681 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 C10orf120Q5SQS8 335 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 KLHDC10Q6PID8 442 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 C16orf89Q6UX73 402 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PIWIL4Q7Z3Z4 852 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SDCCAG8Q86SQ7 713 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SYVN1Q86TM6 617 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CCDC117Q8IWD4 279 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SLC15A3Q8IY34 581 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 C10orf111Q8N326 155 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 ICA1LQ8NDH6 482 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 OR4K2Q8NGD2 314 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 JADE3Q92613 823 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 BHMTQ93088 406 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 ASB9Q96DX5 294 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 L3HYPDHQ96EM0 354 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CDKN2AIPNLQ96HQ2 116 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SEPT5Q99719 369 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 C1orf50Q9BV19 199 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 VCXQ9H320 206 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.02□□□□□ -1.456e-12■■■□□ 15
CLCN3-201ENST00000347613 MARCH2Q9P0N8 246 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 VTI1BQ9UEU0 232 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SNX13Q9Y5W8 968 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PIKFYVEQ9Y2I7 2098 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 NUP214P35658 2090 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 NPEPPSL1A6NEC2 478 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 K7ERQ8 282 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 TPST1O60507 370 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SNAP91O60641 907 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PRAMEF11O60813 436 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CLASP2O75122 1294 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 H2AFYO75367 372 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 ECI2O75521 394 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 APOA4P06727 396 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 C8BP07358 591 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SLC5A2P31639 672 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 GGT5P36269 586 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 GRIA3P42263 894 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PSMD8P48556 350 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 UFM1P61960 85 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 HERVK_113P63132 956 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 COG7P83436 770 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 NRG1Q02297 640 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CREB5Q02930 508 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PRKCQQ04759 706 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 APOFQ13790 326 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 RFTN1Q14699 578 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CYTH1Q15438 398 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CHST15Q7LFX5 561 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PIP4K2CQ8TBX8 421 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 EEF1AKMT1Q8WVE0 214 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 TWIST2Q8WVJ9 160 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SGCDQ92629 289 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 FUBP1Q96AE4 644 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 SERPINB11Q96P15 392 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 TRAPPC9Q96Q05 1148 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 ERVK-6Q9BXR3 956 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CARS2Q9HA77 564 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 INTS7Q9NVH2 962 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 DDX18Q9NVP1 670 aaKnown RBP6.02□□□□□ -1.45
CLCN3-201ENST00000347613 PDP2Q9P2J9 529 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 KLF15Q9UIH9 416 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 CLEC4EQ9ULY5 219 aa6.02□□□□□ -1.45
CLCN3-201ENST00000347613 A0A0J9YYE9 177 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 C2orf78A6NCI8 922 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 NR5A2O00482 541 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 TRIM38O00635 465 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 MRASO14807 208 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 ACOX3O15254 700 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 TBC1D4O60343 1298 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 NRP2O60462 931 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SEC24AO95486 1093 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SNRPB2P08579 225 aaKnown RBP6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SLC2A3P11169 496 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SLC6A2P23975 617 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 EEF1DP29692 281 aaKnown RBP6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SLC11A1P49279 550 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 HTR6P50406 440 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 SCNN1BP51168 640 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 RENBPP51606 427 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 ZNF140P52738 457 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-201ENST00000347613 FKBP1BP68106 108 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 PLIN5Q00G26 463 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 RHDQ02161 417 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 HERC3Q15034 1050 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 ZXDCQ2QGD7 858 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-201ENST00000347613 CTXN3Q4LDR2 81 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 NHSL2Q5HYW2 709 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 KIAA2013Q8IYS2 634 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 LGI2Q8N0V4 545 aa6.01□□□□□ -1.45
CLCN3-201ENST00000347613 CRIPAKQ8N1N5 446 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms