RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SLC12A1Q13621 1099 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ITGA9Q13797 1035 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SLC14A2Q15849 920 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 HSF5Q4G112 596 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 TAF1BQ53T94 588 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 NCEH1Q6PIU2 408 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 KIAA0408Q6ZU52 694 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ARID3BQ8IVW6 561 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CPXM2Q8N436 756 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 TMEM151AQ8N4L1 468 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 MDGA1Q8NFP4 955 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RAB3IL1Q8TBN0 382 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PHOSPHO2Q8TCD6 241 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CALML6Q8TD86 181 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SH3RF2Q8TEC5 729 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 LRRC37BQ96QE4 947 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 OLFM1Q99784 485 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 OMDQ99983 421 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 TASP1Q9H6P5 420 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ECT2Q9H8V3 914 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 THAP1Q9NVV9 213 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 DNMT3BQ9UBC3 853 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RUVBL2Q9Y230 463 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ANKRD6Q9Y2G4 727 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PER2O15055 1255 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RPP40O75818 363 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SERPINE1P05121 402 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SBK3P0C264 359 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 MYL2P10916 166 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RALBP11234 206 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 GCKP35557 465 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SLC1A6P48664 564 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RHOAP61586 193 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 NCALDP61601 193 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CCDC15Q0P6D6 951 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SEMA3AQ14563 771 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 INO80DQ53TQ3 878 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 NAPRTQ6XQN6 538 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 MTDHQ86UE4 582 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CRLF3Q8IUI8 442 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 DCAF4L2Q8NA75 395 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 OR6K2Q8NGY2 324 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF398Q8TD17 642 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 NXNL1Q96CM4 212 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 MOCOSQ96EN8 888 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PRR11Q96HE9 360 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 GPR78Q96P69 363 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 TM6SF2Q9BZW4 377 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ACSS2Q9NR19 701 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ARHGAP26Q9UNA1 814 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF510Q9Y2H8 683 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 MTF2Q9Y483 593 aaPredicted RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CD3EAPO15446 510 aaKnown RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CLASP2O75122 1294 aaKnown RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 DCTN3O75935 186 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 RHOP08100 348 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 PTPN2P17706 415 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CRABP2P29373 138 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 POLD2P49005 469 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF140P52738 457 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 EPHA5P54756 1037 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 POU4F1Q01851 419 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 HECTD2Q5U5R9 776 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 FAM109BQ6ICB4 259 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 GLT6D1Q7Z4J2 308 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CMTM8Q8IZV2 173 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 SDR16C5Q8N3Y7 309 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 EFHBQ8N7U6 833 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 GBP7Q8N8V2 638 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 OR4K2Q8NGD2 314 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 OR6Y1Q8NGX8 325 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 MAGEC3Q8TD91 643 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 STYXQ8WUJ0 223 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 USP13Q92995 863 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CDKN2AIPNLQ96HQ2 116 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 SCYL1Q96KG9 808 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 SORT1Q99523 831 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 INTS6Q9UL03 887 aaKnown RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 DNAJC16Q9Y2G8 782 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CRYL1Q9Y2S2 319 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ACOT9Q9Y305 439 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 HCFC2Q9Y5Z7 792 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 ANKRD66B4E2M5 251 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 DNAJC8O75937 253 aaPredicted RBP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 GLP2RO95838 553 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 SERPINB3P29508 390 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 GKP32189 559 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CLCN5P51795 746 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CDKN2DP55273 166 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 CTBSQ01459 385 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 PLAURQ03405 335 aa9.22□□□□□ -0.93
ATG4A-202ENST00000345734 NSUN2Q08J23 767 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATG4A-202ENST00000345734 LAMB3Q13751 1172 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms