RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 MAGED4Q96JG8 741 aa13.49□□□□□ -0.25
TMEM248-201ENST00000341567 GIMAP4Q9NUV9 329 aa13.49□□□□□ -0.25
TMEM248-201ENST00000341567 MRPS23Q9Y3D9 190 aaKnown RBP13.49□□□□□ -0.25
TMEM248-201ENST00000341567 FAM32AQ9Y421 112 aaKnown RBP13.49□□□□□ -0.25
TMEM248-201ENST00000341567 SCAMP1O15126 338 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 GPR32O75388 356 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 CCT8P50990 548 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 XIAPP98170 497 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 CRY1Q16526 586 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 VPS26BQ4G0F5 336 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TXNDC8Q6A555 127 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 C2orf73Q8N5S3 287 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ABCB10Q9NRK6 738 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TRNAU1APQ9NX07 287 aaKnown RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 CD84Q9UIB8 345 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 A0A1W2PQ67 120 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TMEM247A6NEH6 219 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TMEM233B4DJY2 109 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ITGAXP20702 1163 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 LPOP22079 712 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 SERPINA4P29622 427 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 DEFA1P59665 94 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 DEFA3P59666 94 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ABRAXAS1Q6UWZ7 409 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ZNF598Q86UK7 904 aaKnown RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 STAG3L4Q8TBR4 150 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 LINGO1Q96FE5 620 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 PTTG2Q9NZH5 202 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 CPQQ9Y646 472 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TEX264Q9Y6I9 313 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ASCC3Q8N3C0 2202 aaKnown RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 SOCS7O14512 581 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 SNAP91O60641 907 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ALOX12P18054 663 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 CCR10P46092 362 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 GNA12Q03113 381 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 HECTD2Q5U5R9 776 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TTC9BQ8N6N2 239 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ARFGAP1Q8N6T3 406 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ELMO1Q92556 727 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 SKA1Q96BD8 255 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 GPR21Q99679 349 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 RCOR3Q9P2K3 495 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 SRRDQ9UH36 339 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 ANKRD6Q9Y2G4 727 aa13.48□□□□□ -0.25
TMEM248-201ENST00000341567 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
TMEM248-201ENST00000341567 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 LY75O60449 1722 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 TIAM2Q8IVF5 1701 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 PDLIM1O00151 329 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 MATN3O15232 486 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 ARHGEF9O43307 516 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CHRNA1P02708 482 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 LBPP18428 481 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 RAP1GDS1P52306 607 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 NAB1Q13506 487 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CACHD1Q5VU97 1274 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 ZNF276Q8N554 614 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 RTL3Q8N8U3 475 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 OR10T2Q8NGX3 314 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 UTP15Q8TED0 518 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 TMEM159Q96B96 161 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 BTBD9Q96Q07 612 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 NPY6RQ99463 290 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 TRAF6Q9Y4K3 522 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 PDZK1P1A8MUH7 402 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 KCNE1P15382 129 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 MSH3P20585 1137 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 LIMK2P53671 638 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 KCNJ11Q14654 390 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CAND1Q86VP6 1230 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CROCCP3Q8IVE0 287 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 SFRP1Q8N474 314 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 NFKBIZQ9BYH8 718 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 DPY30Q9C005 99 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CXorf21Q9HAI6 301 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 RREB1Q92766 1687 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 TMEM114B3SHH9 223 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 LRATO95237 230 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 IL1BP01584 269 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
TMEM248-201ENST00000341567 RHOQP17081 205 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 CCNA2P20248 432 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 GLUD2P49448 558 aa13.47□□□□□ -0.25
TMEM248-201ENST00000341567 PRKAA2P54646 552 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms