RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 XKR5Q6UX68 686 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 CCDC117Q8IWD4 279 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 MINDY1Q8N5J2 469 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 BPIFB6Q8NFQ5 453 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 FBXL20Q96IG2 436 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 FANCEQ9HB96 536 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 SCN3BQ9NY72 215 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 IFT80Q9P2H3 777 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 FAM50BQ9Y247 325 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ARID2Q68CP9 1835 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 DNAJC25-GNG10A0A024R161 153 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 CCL22O00626 93 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 FBP2O00757 339 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 KATNA1O75449 491 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 CLIC3O95833 236 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 THRBP10828 461 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 NCK1P16333 377 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 CRYBB1P53674 252 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 BNIP3Q12983 259 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 TOP3AQ13472 1001 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 USP41Q3LFD5 358 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 PDCD4Q53EL6 469 aaKnown RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 GLYATQ6IB77 296 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 OVOS1Q6IE37 1185 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 LCN8Q6JVE9 175 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ARHGAP36Q6ZRI8 547 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 THAP5Q7Z6K1 395 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 AADATQ8N5Z0 425 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 RTL3Q8N8U3 475 aaKnown RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 FIG4Q92562 907 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 PGAP3Q96FM1 320 aaPredicted RBP9.4□□□□□ -0.9
TRERF1-201ENST00000340840 TBATAQ96M53 351 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 IL12RB2Q99665 862 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 SH3GL1Q99961 368 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 CHID1Q9BWS9 393 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 DGCR6LQ9BY27 220 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF385DQ9H6B1 395 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 IGSF5Q9NSI5 407 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF229Q9UJW7 825 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 SSC5DA1L4H1 1573 aa9.4□□□□□ -0.9
TRERF1-201ENST00000340840 NME4O00746 187 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 GABRDO14764 452 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 MAGEB3O15480 346 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 SIX3O95343 332 aaPredicted RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 CYBBP04839 570 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 ANXA6P08133 673 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 CTSHP09668 335 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 JAK1P23458 1154 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 LEPRP48357 1165 aaKnown RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 RPL34P49207 117 aaKnown RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 EIF2B2P49770 351 aaKnown RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 SOX4Q06945 474 aaPredicted RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 MOGQ16653 247 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 GALNT18Q6P9A2 607 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 TAS2R42Q7RTR8 314 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 RNF180Q86T96 592 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 PELI3Q8N2H9 469 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 NKAPQ8N5F7 415 aaKnown RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 KLHL5Q96PQ7 755 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 POLR1EQ9GZS1 481 aaKnown RBP9.4□□□□□ -0.91
TRERF1-201ENST00000340840 MFSD1Q9H3U5 465 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 LIMD1Q9UGP4 676 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.91
TRERF1-201ENST00000340840 IRAK2O43187 625 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 RASAL1O95294 804 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 PSEN2P49810 448 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 POLR2JP52435 117 aaKnown RBP9.39□□□□□ -0.91
TRERF1-201ENST00000340840 TBX4P57082 545 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 RAB39AQ14964 217 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 EGFLAMQ63HQ2 1017 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 SCIMPQ6UWF3 145 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 IFNL1Q8IU54 200 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 ARRDC4Q8NCT1 418 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 METTL6Q8TCB7 284 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 OLFM1Q99784 485 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 EGFL8Q99944 293 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 EIF3LQ9Y262 564 aaKnown RBP9.39□□□□□ -0.91
TRERF1-201ENST00000340840 TIMM22Q9Y584 194 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 A0A1W2PP18 115 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 C2orf81A6NN90 581 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 H3BMM5 538 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 MSI1O43347 362 aaKnown RBP9.39□□□□□ -0.91
TRERF1-201ENST00000340840 FGF1P05230 155 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 HMBSP08397 361 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 PCNAP12004 261 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 HLA-DPA1P20036 260 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 MSH3P20585 1137 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 PSMD8P48556 350 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 CPT1AP50416 773 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 ZNF846Q147U1 533 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 TXNDC11Q6PKC3 985 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
TRERF1-201ENST00000340840 EID3Q8N140 333 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms