RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 PTRH1Q86Y79 214 aaKnown RBP20.11■□□□□ 0.81
UBC-201ENST00000339647 SLC22A9Q8IVM8 553 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 TTC30BQ8N4P2 665 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 OSCP1Q8WVF1 389 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 TWIST2Q8WVJ9 160 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 CCDC97Q96F63 343 aaPredicted RBP20.11■□□□□ 0.81
UBC-201ENST00000339647 ZNF419Q96HQ0 510 aaPredicted RBP20.11■□□□□ 0.81
UBC-201ENST00000339647 CTRCQ99895 268 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 SCHIP1Q9P0W5 487 aaPredicted RBP20.11■□□□□ 0.81
UBC-201ENST00000339647 ANKMY1Q9P2S6 941 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 ERVK-11Q9UQG0 969 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 MYLKQ15746 1914 aa20.11■□□□□ 0.81
UBC-201ENST00000339647 ASPDHA6ND91 283 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 MSI1O43347 362 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 GMNNO75496 209 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 SIX3O95343 332 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 ALOX5P09917 674 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 LINC00032P0C843 101 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 TGFB3P10600 412 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 THRBP10828 461 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 HGFP14210 728 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 AGXTP21549 392 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 INAQ16352 499 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 PAGE2BQ5JRK9 111 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 GPR158Q5T848 1215 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 BLOC1S3Q6QNY0 202 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 CATSPER4Q7RTX7 472 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 DCP1BQ8IZD4 617 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 CRYBG2Q8N1P7 616 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 AGBL3Q8NEM8 1001 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 PTCD2Q8WV60 388 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 TMBIM1Q969X1 311 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 EFHD2Q96C19 240 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 TUBGCP3Q96CW5 907 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 NFKBIZQ9BYH8 718 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 TUBB1Q9H4B7 451 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 WDR6Q9NNW5 1121 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 NOX1Q9Y5S8 564 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 CDK14O94921 469 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 ALPLP05186 524 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 FYNP06241 537 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 ALDH4A1P30038 563 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 ALDH3A2P51648 485 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 LSM3P62310 102 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 DAG1Q14118 895 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 NOMO2Q5JPE7 1267 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 RBM48Q5RL73 367 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 LEMD2Q8NC56 503 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 DPF3Q92784 378 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 VAT1Q99536 393 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 R3HDMLQ9H3Y0 253 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 TOR3AQ9H497 397 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 MID1IP1Q9NPA3 183 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 HPS4Q9NQG7 708 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 SNTG2Q9NY99 539 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 EVLQ9UI08 416 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 MRPL42Q9Y6G3 142 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 A0A0G2JMZ2 1700 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 LRRC37A2A6NM11 1700 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 UMPSP11172 480 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 BMP4P12644 408 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 BAG6P46379 1132 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 KIAA2013Q8IYS2 634 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 C8orf59Q8N0T1 100 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 MFSD4AQ8N468 514 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 Q8N9G6 341 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 BPIFB1Q8TDL5 484 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 UBXN10Q96LJ8 280 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 ALOXE3Q9BYJ1 711 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 SDR39U1Q9NRG7 319 aaPredicted RBP20.1■□□□□ 0.81
UBC-201ENST00000339647 PCDHB3Q9Y5E6 796 aa20.1■□□□□ 0.81
UBC-201ENST00000339647 CENPFP49454 3210 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 AP3B1O00203 1094 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 TSPAN1O60635 241 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 GP2P55259 537 aaKnown RBP20.09■□□□□ 0.81
UBC-201ENST00000339647 OR4D2P58180 307 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 CTU2Q2VPK5 515 aaKnown RBP20.09■□□□□ 0.81
UBC-201ENST00000339647 C6orf141Q5SZD1 244 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 ANKRD34AQ69YU3 496 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 TAF2Q6P1X5 1199 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 LDB1Q86U70 411 aaPredicted RBP20.09■□□□□ 0.81
UBC-201ENST00000339647 SLC22A16Q86VW1 577 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 CHST13Q8NET6 341 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 MUL1Q969V5 352 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 NSUN5Q96P11 429 aaKnown RBP20.09■□□□□ 0.81
UBC-201ENST00000339647 TRMOQ9BU70 441 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 TRIM54Q9BYV2 358 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 TREX1Q9NSU2 369 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 HOXC10Q9NYD6 342 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 PTGES3LE9PB15 166 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 HBP1O60381 514 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 PMPCBO75439 489 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 IST1P53990 364 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 CXCL9Q07325 125 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 PLEKHG7Q6ZR37 379 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 ISCA2Q86U28 154 aa20.09■□□□□ 0.81
UBC-201ENST00000339647 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms