RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SPATA31D3P0C874 917 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 FDXRP22570 491 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 STX5Q13190 355 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 LRP8Q14114 963 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 SHHQ15465 462 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 ZFP1Q6P2D0 407 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 GALNT7Q86SF2 657 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 ST13P4Q8IZP2 240 aaPredicted RBP16.27■□□□□ 0.19
LITAF-201ENST00000339430 GALNT4Q8N4A0 578 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 ATP6V1E2Q96A05 226 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 TRAPPC9Q96Q05 1148 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 SPON2Q9BUD6 331 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.27■□□□□ 0.19
LITAF-201ENST00000339430 CATSPERZQ9NTU4 200 aa16.27■□□□□ 0.19
LITAF-201ENST00000339430 LAMA3Q16787 3333 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 H3BMM5 538 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 PRRG1O14668 218 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 RPP40O75818 363 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 FGF1P05230 155 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 SNRPB2P08579 225 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 PMLP29590 882 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 SLC6A4P31645 630 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 GRIA2P42262 883 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 ERVFC1P60507 584 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 HERVK_113P63132 956 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 SH3BP2P78314 561 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 PFKFB4Q16877 469 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 MRNIPQ6NTE8 343 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 L3HYPDHQ96EM0 354 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 C19orf60Q96EN9 201 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 FEM1CQ96JP0 617 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 NSMCE3Q96MG7 304 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 NSUN5Q96P11 429 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 TCF25Q9BQ70 676 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 ERVK-6Q9BXR3 956 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 FAM50BQ9Y247 325 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 F5H5T6 163 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 RNASEH2AO75792 299 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 SERPINF2P08697 491 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 ALDOCP09972 364 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 HLA-DPA1P20036 260 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 RGRP47804 291 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 INHBCP55103 352 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 FOXA1P55317 472 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 IL23RQ5VWK5 629 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 UGT2A3Q6UWM9 527 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 OR4L1Q8NH43 312 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 BRSK1Q8TDC3 778 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 BTBD9Q96Q07 612 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 KCNA7Q96RP8 456 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 PDFQ9HBH1 243 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 SPATS2LQ9NUQ6 558 aaKnown RBP16.26■□□□□ 0.19
LITAF-201ENST00000339430 HSFX1Q9UBD0 423 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 YIPF1Q9Y548 306 aa16.26■□□□□ 0.19
LITAF-201ENST00000339430 MRASO14807 208 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 DNAJA2O60884 412 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 ZNF37AP17032 561 aaPredicted RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 MAPRE2Q15555 327 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 PITRM1Q5JRX3 1037 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 LARP4Q71RC2 724 aaKnown RBP eCLIP16.25■□□□□ 0.192e-12■■■□□ 15.7
LITAF-201ENST00000339430 GPR65Q8IYL9 337 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 ZNF483Q8TF39 744 aaPredicted RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 MID1IP1Q9NPA3 183 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 PAPOLBQ9NRJ5 636 aaKnown RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 UTP6Q9NYH9 597 aaKnown RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 GMPR2Q9P2T1 348 aaKnown RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 SPO11Q9Y5K1 396 aa16.25■□□□□ 0.19
LITAF-201ENST00000339430 ZFP37Q9Y6Q3 630 aaPredicted RBP16.25■□□□□ 0.19
LITAF-201ENST00000339430 C15orf38-AP3S2A0A0A6YYH1 394 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 PRSS51A0A1B0GVH4 220 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 PRORSD1PA6NEY8 169 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 C9JVG2 144 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CRTAMO95727 393 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 FESP07332 822 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CA3P07451 260 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 FMO4P31512 558 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 MAPKAPK2P49137 400 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CHN2P52757 468 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 YBEYP58557 167 aaPredicted RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 CREMQ03060 361 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 ACVR1Q04771 509 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 TNK2Q07912 1038 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 GALNT1Q10472 559 aaPredicted RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 KIF19Q2TAC6 998 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CYP2R1Q6VVX0 501 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 ARPINQ7Z6K5 226 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 DLG3Q92796 817 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 RMDN1Q96DB5 314 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 ASB9Q96DX5 294 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CNBD2Q96M20 576 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 AKTIPQ9H8T0 292 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 FNDC3AQ9Y2H6 1198 aaKnown RBP16.24■□□□□ 0.19
LITAF-201ENST00000339430 DNAJC15Q9Y5T4 150 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 CDK14O94921 469 aa16.24■□□□□ 0.19
LITAF-201ENST00000339430 GFAPP14136 432 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms