RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CDC7O00311 574 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 MATN2O00339 956 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ENTPD5O75356 428 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 NDUFS3O75489 264 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 IPO13O94829 963 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 RHOBTB1O94844 696 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SORBS2O94875 1100 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SERPINA6P08185 405 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PTPN4P29074 926 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SKIV2L2P42285 1042 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 RPL14P50914 215 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 EPHA5P54756 1037 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 BCL2L1Q07817 233 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PFKFB4Q16877 469 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 GEN1Q17RS7 908 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PRSS36Q5K4E3 855 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SH2D4BQ5SQS7 431 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 AGAP9Q5VTM2 703 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 CLEC6AQ6EIG7 209 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PSRC1Q6PGN9 363 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SDCCAG8Q86SQ7 713 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ADIPOR2Q86V24 386 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 KDM1BQ8NB78 822 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 RBM15BQ8NDT2 890 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 FAM13CQ8NE31 585 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 GRIN3AQ8TCU5 1115 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ACDQ96AP0 544 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ASIC4Q96FT7 647 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 MYO19Q96H55 970 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 IL26Q9NPH9 171 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 NCKIPSDQ9NZQ3 722 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 YBX2Q9Y2T7 364 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF711Q9Y462 761 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PTGDR2Q9Y5Y4 395 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 A0A0J9YYE9 177 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 CFAP73A6NFT4 308 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 GSC2O15499 205 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SKAP2O75563 359 aaPredicted RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP6V1G2O95670 118 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 TRBC1P01850 177 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 UGT2B4P06133 528 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 HMGCLP35914 325 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 POLD2P49005 469 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PFKPQ01813 784 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PDAP1Q13442 181 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ACAP2Q15057 778 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SHHQ15465 462 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 TSNQ15631 228 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 CDKN3Q16667 212 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PPP1R3AQ16821 1122 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 LSM12Q3MHD2 195 aaKnown RBP7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 MPP7Q5T2T1 576 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 VN1R2Q8NFZ6 395 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 EEF1AKMT1Q8WVE0 214 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 BTBD10Q9BSF8 475 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ZDHHC6Q9H6R6 413 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ZFYVE1Q9HBF4 777 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 SPHK2Q9NRA0 654 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 LZTS1Q9Y250 596 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ASB1Q9Y576 335 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 PRSS21Q9Y6M0 314 aa7.37□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP6AP2A0A1C7CYW4 349 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 TTC34A8MYJ7 566 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 GYG2O15488 501 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 HTRA2O43464 458 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP6AP2O75787 350 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 SUPT7LO94864 414 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 ALOX15P16050 662 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 BPIP17213 487 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 ATP5F1P24539 256 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 MLLT3P42568 568 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 AGTR2P50052 363 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PRKAA2P54646 552 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 SLC25A3Q00325 362 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 ZNF77Q15935 545 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 DBN1Q16643 649 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 RALGPS1Q5JS13 557 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 CFAP157Q5JU67 520 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 FAM45BPQ6NSW5 357 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 AFTPHQ6ULP2 937 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 GALNT7Q86SF2 657 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 DCBLD1Q8N8Z6 715 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 OR2AP1Q8NGE2 309 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 FAM45AQ8TCE6 357 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 AGAP11Q8TF27 550 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 WDR60Q8WVS4 1066 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PEX13Q92968 403 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 DENND2DQ9H6A0 471 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 UTP6Q9NYH9 597 aaKnown RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 GTSE1Q9NYZ3 720 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 NKX1-2Q9UD57 310 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 LNPEPQ9UIQ6 1025 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 PACSIN3Q9UKS6 424 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 RAP2CQ9Y3L5 183 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 BRWD1Q9NSI6 2320 aa7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
SRFBP1-201ENST00000339397 COL6A3P12111 3177 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms