RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 BAIAP3O94812 1187 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 DUSP4Q13115 394 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MAPRE2Q15555 327 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MS4A13Q5J8X5 152 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 SAMD4BQ5PRF9 694 aaKnown RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 C10orf120Q5SQS8 335 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MSANTD2Q6P1R3 559 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 LINC00523Q86TU6 105 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 EPHX4Q8IUS5 362 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 CENPLQ8N0S6 344 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 TERB1Q8NA31 727 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 BCL7CQ8WUZ0 217 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 ITPKCQ96DU7 683 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 GPATCH1Q9BRR8 931 aaKnown RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 ATXN3LQ9H3M9 355 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 PALMDQ9NP74 551 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 HACD3Q9P035 362 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MYO16Q9Y6X6 1858 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MTMR11A4FU01 709 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 TMEM247A6NEH6 219 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 SAC3D1A6NKF1 404 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 HOXA2O43364 376 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 CNTN5O94779 1100 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 CXCL10P02778 98 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 HLA-DQB2P05538 268 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 SLC35E2BP0CK96 405 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 SLC2A3P11169 496 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MNX1P50219 401 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 POU6F1Q14863 301 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 MOGQ16653 247 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 C8orf82Q6P1X6 216 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 TMEM26Q6ZUK4 368 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 DHFR2Q86XF0 187 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 ZNF354CQ86Y25 554 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 CAMK1DQ8IU85 385 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 OR2T34Q8NGX1 318 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 OR2T3Q8NH03 318 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 TSNARE1Q96NA8 513 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 FCRL5Q96RD9 977 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 TBL1YQ9BQ87 522 aa18.74■□□□□ 0.59
PSPC1-201ENST00000338910 NOL6Q9H6R4 1146 aaKnown RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 IARS2Q9NSE4 1012 aaKnown RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 RUVBL2Q9Y230 463 aaKnown RBP18.74■□□□□ 0.59
PSPC1-201ENST00000338910 HOXD12P35452 270 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 BMXP51813 675 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MERTKQ12866 999 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 BNIP3Q12983 259 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 FASTKQ14296 549 aaKnown RBP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 SLC36A3Q495N2 470 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ALFQ53S48 1182 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 TSTD2Q5T7W7 516 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ANKRD26P1Q6NSI1 321 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 LRRC8EQ6NSJ5 796 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 C16orf87Q6PH81 154 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 PRSS55Q6UWB4 352 aaPredicted RBP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 GIPC2Q8TF65 315 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 FICDQ9BVA6 458 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MRPL9Q9BYD2 267 aaKnown RBP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 IL37Q9NZH6 218 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 XPR1Q9UBH6 696 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ITGB1BP2Q9UKP3 347 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 PSMD3O43242 534 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 SULT1C4O75897 302 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ANXA9O76027 345 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 VNN2O95498 520 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 RXRGP48443 463 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 GPR17Q13304 367 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 SQLEQ14534 574 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 AGKQ53H12 422 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 AFMIDQ63HM1 303 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 NIPAL1Q6NVV3 410 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ZC3HC1Q86WB0 502 aaKnown RBP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 CCNYL1Q8N7R7 359 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 SPPL2BQ8TCT7 592 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 NAA50Q9GZZ1 169 aaKnown RBP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MUC3BQ9H195 1237 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 ARMC7Q9H6L4 198 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MRGBPQ9NV56 204 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.73■□□□□ 0.59
PSPC1-201ENST00000338910 MARCH2Q9P0N8 246 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 GNPTGQ9UJJ9 305 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 FADS3Q9Y5Q0 445 aa18.73■□□□□ 0.59
PSPC1-201ENST00000338910 HTR3EA5X5Y0 456 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 NPHS1O60500 1241 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 ATP6V1B2P21281 511 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 SAT1P21673 171 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 GRIA3P42263 894 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 USP10Q14694 798 aaKnown RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 FAM45BPQ6NSW5 357 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 TIGD7Q6NT04 549 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 SLC15A3Q8IY34 581 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 FAM45AQ8TCE6 357 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 CORO1BQ9BR76 489 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 POLR1BQ9H9Y6 1135 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 TLR8Q9NR97 1041 aaKnown RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 CCM2LQ9NUG4 571 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 CCDC167Q9P0B6 97 aa18.72■□□□□ 0.59
PSPC1-201ENST00000338910 FNDC1Q4ZHG4 1894 aaPredicted RBP18.72■□□□□ 0.59
PSPC1-201ENST00000338910 SLC12A8A0AV02 714 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms