RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 VPS4BO75351 444 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 CXCL14O95715 111 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 CPA3P15088 417 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 RPL17P18621 184 aaKnown RBP5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC1A6P48664 564 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PTSQ03393 145 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PRKAA1Q13131 559 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 ITGA9Q13797 1035 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 GRAMD4Q6IC98 578 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 MRNIPQ6NTE8 343 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 RETSATQ6NUM9 610 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 ADAMTSL4Q6UY14 1074 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 MSANTD1Q6ZTZ1 278 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 RAB44Q7Z6P3 723 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 APCDD1Q8J025 514 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 NDUFAF2Q8N183 169 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PGBD3Q8N328 593 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 TXNDC5Q8NBS9 432 aaKnown RBP5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 OR7D4Q8NG98 312 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 LRRC8CQ8TDW0 803 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PTERQ96BW5 349 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 ZNF512Q96ME7 567 aaPredicted RBP5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 FAM111AQ96PZ2 611 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PITPNM3Q9BZ71 974 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 NT5MQ9NPB1 228 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 TXLNGQ9NUQ3 528 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 CNOT6Q9ULM6 557 aaKnown RBP5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 SLC4A7Q9Y6M7 1214 aa5.34□□□□□ -1.56
PRPF4B-201ENST00000337659 TBL1XO60907 577 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 STMN1P16949 149 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PTPN4P29074 926 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CD70P32970 193 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ALDH18A1P54886 795 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TAS2R39P59534 338 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IRF9Q00978 393 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CAMK2GQ13555 558 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 UNC50Q53HI1 259 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ARHGAP15Q53QZ3 475 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ERN2Q76MJ5 926 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 C10orf107Q8IVU9 208 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 C4orf33Q8N1A6 199 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ARHGAP24Q8N264 748 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CCNYQ8ND76 341 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 USP7Q93009 1102 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 FUBP1Q96AE4 644 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 RAB7BQ96AH8 199 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 MIPEPQ99797 713 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 WWP1Q9H0M0 922 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 SCUBE2Q9NQ36 999 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 C20orf96Q9NUD7 363 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 THAP10Q9P2Z0 257 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 APPL1Q9UKG1 709 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IKZF3Q9UKT9 509 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CLEC4EQ9ULY5 219 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 BRCA2P51587 3418 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PROB1E7EW31 1015 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 MYO1CO00159 1063 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 QSOX1O00391 747 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 E2F3O00716 465 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 UBFD1O14562 309 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ANKRD28O15084 1053 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CHUKO15111 745 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ITM2AO43736 263 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TBX19O60806 448 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CCDC22O60826 627 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PSIP1O75475 530 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IPO13O94829 963 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 POP4O95707 220 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IL1RNP18510 177 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 VIPR1P32241 457 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 HPDP32754 393 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ELF3P78545 371 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ZNF789Q5FWF6 425 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CRTC1Q6UUV9 634 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 DEFB128Q7Z7B8 93 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 NPAS3Q8IXF0 933 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 NSMCE1Q8WV22 266 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 YME1L1Q96TA2 773 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 TRIM55Q9BYV6 548 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 IARS2Q9NSE4 1012 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ACOT9Q9Y305 439 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 POC1B-GALNT4F8VUJ3 575 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PRAMEF12O95522 483 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CTSLP07711 333 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 NQO1P15559 274 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CEBPBP17676 345 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 BGNP21810 368 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 AOAHP28039 575 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 OPRD1P41143 372 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 FOXK2Q01167 660 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 NFATC2Q13469 925 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 SIM2Q14190 667 aaPredicted RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 HSP90AA5PQ58FG0 334 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 PPM1LQ5SGD2 360 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 SWT1Q5T5J6 900 aaKnown RBP5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 CNSTQ6PJW8 725 aa5.33□□□□□ -1.56
PRPF4B-201ENST00000337659 ELMOD1Q8N336 334 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms